Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00574 ATGAGCATAAAGTCAGTAAAAAACTTTGGGACAACGACAGGGTTTGGCTCATCATGTGGAGCATGCAAGTTCCTAAGGAGAAAATGCACGAGTGATTGTGTATTTGCTCCTTACTTTTCCTACGACCAAGCTTCAACCCATTTTGCTGCAGTGCATAAGATTTATGGTGCTAGTAACGTCTCCAAGCTACTGTCACATCTTCCAATCCACAATAGAAGTGATGCTGCCATCACCATATCTTATGAAGCCTTGGCTCGCATGCAGGATCCAATATATGGCTGTGTTGCTCATATCTATGCATTGCAGCATCAGGTTGCTAGCTTGCAAGAGGAGATAGATGCTCTTGGAAGTCTAATGGCAAATTCCACAGTTAGTGTTGTCAATTGTGGCAGTGACCAAGAACCAATGACCTCAAACAATGGAACACAATATAATATTTTGCAGCATGATGCTACAAGAACACAGTATTGTCAGAATAATCTGGCTAATTTTCTTTCGCAAGAAGCTATTAGTGCTACGGTCTTCAAAAGTCTCGACTCACAGATGGATATAGAGCTTCCAAGCGCACACGTGGAAGAACCTTCTTCATTTGGTGATTTCAACTCCAATCCGTTAGAACAGTTCCTATCTGGAATTGACCAAGAGGTGTTCGTGAATCATCCATGGTTCAAGCATAATGCAGACATAAAGAACTAG 696 0.4181 MSIKSVKNFGTTTGFGSSCGACKFLRRKCTSDCVFAPYFSYDQASTHFAAVHKIYGASNVSKLLSHLPIHNRSDAAITISYEALARMQDPIYGCVAHIYALQHQVASLQEEIDALGSLMANSTVSVVNCGSDQEPMTSNNGTQYNILQHDATRTQYCQNNLANFLSQEAISATVFKSLDSQMDIELPSAHVEEPSSFGDFNSNPLEQFLSGIDQEVFVNHPWFKHNADIKN 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00574 231 PANTHER LOB DOMAIN CONTAINING PROTEIN 13 229 - -
Gma14g00574 231 ProSiteProfiles LOB domain profile. 17 119 IPR004883 -
Gma14g00574 231 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gma14g00574 231 Pfam Lateral organ boundaries (LOB) domain 18 114 IPR004883 -
Gma14g00574 231 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 13 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00574 Gma-Chr14 5516925 5517889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00574 16 224 AS2 family AT5G06080 47.847 3.75e-58 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma14g00574 LOB 7.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00574 K13945 - gmx:100787638 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00574 14 5516925 5517889 Gma14g00574 14 5516925 5517889 ECH