Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00573 ATGGCGAATCGTTGGTGGGCCGGGAGCGCGACGGTGAAGCCCAGTGAACAAGACAACGGTGACAACAACGGTACTCCCACCAACAGTGGGAACAGTAACACCAAAGTTAACGCGGTTCTCGAGGACGACGCAAACACCAACGAGCGCGACGGCGAAGAGCAGACCCTCAGCGGCGGGCGGCGGCCGCGTGGCAGGCCGCCAGGGTCAAAGAACAAGCCAAAGCCGCCGGTGGTGATAACGAAAGAGAGCCCCAACGCGCTCTGCAGCCACATCCTTGAGATCAGCGACGGCAGCGACGTGGCTGAGTGCATTGCTATCTTCGCCACGCGCCGCCACCGCGGCGTCTCAGTCCTCAGCGGCAACGGTTTCGTCACCAACGTCACGCTCCGGCAGCCGGCGGCCCCTGGAGGGGTCATCACCCTCCAGGGGCGGTTCGAGATTCTCTCCCTCTCCGGCGCGTTCCTGCCGGCGCCTTCGCCGCCGGAGGCCACCGGACTCACCGTGTACCTCGCCGGCGGGCAGGGGCAGGTGGTCGGAGGAAGCGTGGTGGGACCCCTTGTCACCTCGGGGCCGGTGATTGTTGTTGCTGCTACTTTCGCTAATGCTACCTATGAAAGGTTGCCTTTGGAGGATGAAAAAGGTGAAGAGGACATGCAAGAGGTGAATGAAGGTGATggtggtggaacatcaccaccacaaccaccaccaccaccaccaccaccttcacaaggtgaACAACAGGTTTCAATGCCGGTGTATAATTTGGTGCCTAATAATGAACGACTCAATGGTTTTGAGGGTTGTGTTAATATTTAA 816 0.5551 MANRWWAGSATVKPSEQDNGDNNGTPTNSGNSNTKVNAVLEDDANTNERDGEEQTLSGGRRPRGRPPGSKNKPKPPVVITKESPNALCSHILEISDGSDVAECIAIFATRRHRGVSVLSGNGFVTNVTLRQPAAPGGVITLQGRFEILSLSGAFLPAPSPPEATGLTVYLAGGQGQVVGGSVVGPLVTSGPVIVVAATFANATYERLPLEDEKGEEDMQEVNEGDGGGTSPPQPPPPPPPPSQGEQQVSMPVYNLVPNNERLNGFEGCVNI 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00573 271 PIRSF ESCAROLA 6 267 IPR014476 GO:0003680
Gma14g00573 271 MobiDBLite consensus disorder prediction 229 245 - -
Gma14g00573 271 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 260 - -
Gma14g00573 271 MobiDBLite consensus disorder prediction 42 59 - -
Gma14g00573 271 MobiDBLite consensus disorder prediction 207 253 - -
Gma14g00573 271 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 212 - -
Gma14g00573 271 MobiDBLite consensus disorder prediction 10 41 - -
Gma14g00573 271 CDD DUF296 90 171 IPR005175 -
Gma14g00573 271 ProSiteProfiles PPC domain profile profile. 84 222 IPR005175 -
Gma14g00573 271 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 260 IPR014476 GO:0003680
Gma14g00573 271 MobiDBLite consensus disorder prediction 1 81 - -
Gma14g00573 271 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 200 IPR005175 -
Gma14g00573 271 Gene3D - 89 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00573 Gma-Chr14 5498827 5499745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00573 1 233 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 56.790 2.00e-72 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00573 - - gmx:100787100 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00573 14 5498827 5499745 Gma14g00573 14 5498827 5499745 ECH