Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00571 ATGGAGGGATCTAATGACTCTCAGTACTGGATGTATGTGAAGAGAGAACAAATCCTGAAGCCACAGTACTCACACCTTGAAGCAGCAGTTGGAGATGTCATTAACAACAATTTCTCATGGGAAGAAAGAGCTTTTGCAGAAGATGCGGCTAGATTACTTGGTGGGAGCATGTGGCCTCAAAGATCTTACTCTTGCACCTTTTGCACAAGAGACTTCAAATCTGCTCAAGCCCTTGGGGGTCACATGAATATCCACAGAAGGGACAGGGCTAGGCTCAAACAAAATCATCACAAAAATGATCATTTCATCAAATCCTTATTATTAGGTAATAACCATCACTTTTTATCTGCACCAGAAATCTCCACCCAGTTAGATTGTGGTTTTACTCATGCTTGTTATTCTAGCCCTGCAACTACAATCACAACAACCAGGCTCTCATGTATATCATCCACACAAGAAAATTGTGGCGACCATAATTTTTCACCTTCTTCTTCAATTATCTTGGGCCATGTAGGGTCTCCTAATTCAGAACAAGAAGGGGTAGTCAAAGCAAGGGAGTACAAATTTAATGGCTTGGGAGGTAGCAATTATGTTGAAACAAGTTTGTCCGTGGGACTGACTTCAATGTTTGGCCAAAAATCATCATCACCAACCGTTCCTTGTGGGGACAGATTCAACAATAGTTGCAAGAGGCTAAAGAGTAGCATTTCTTCTCAGCCTCTCTTCCTCAAGCCATGTTCAAATGATAAAAGCTCGGATTTTAAACCTGTGGAACATGGAATGGAGTACTTGGATCTTGAACTCAGGCTAGGGAAACAACAGCAAGTTAAGTAG 834 0.4161 MEGSNDSQYWMYVKREQILKPQYSHLEAAVGDVINNNFSWEERAFAEDAARLLGGSMWPQRSYSCTFCTRDFKSAQALGGHMNIHRRDRARLKQNHHKNDHFIKSLLLGNNHHFLSAPEISTQLDCGFTHACYSSPATTITTTRLSCISSTQENCGDHNFSPSSSIILGHVGSPNSEQEGVVKAREYKFNGLGGSNYVETSLSVGLTSMFGQKSSSPTVPCGDRFNNSCKRLKSSISSQPLFLKPCSNDKSSDFKPVEHGMEYLDLELRLGKQQQVK 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00571 277 Gene3D Classic Zinc Finger 55 110 - -
Gma14g00571 277 ProSiteProfiles Zinc finger C2H2 type domain profile. 63 90 IPR013087 -
Gma14g00571 277 SUPERFAMILY beta-beta-alpha zinc fingers 60 90 IPR036236 -
Gma14g00571 277 ProSitePatterns Zinc finger C2H2 type domain signature. 65 85 IPR013087 -
Gma14g00571 277 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 2 276 - -
Gma14g00571 277 PANTHER OS07G0101800 PROTEIN 2 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00571 Gma-Chr14 5467698 5468531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00571 35 94 C2H2 Transcription Factor Family AT2G37740 73.333 8.82e-25 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma14g00571 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00571 - - gmx:102662367 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02363 02 49699357 49700217 Gma14g00571 14 5467698 5468531 ECH
Gma03g00573 03 16183570 16185249 Gma14g00571 14 5467698 5468531 ECH
Gma18g01704 18 47668065 47669949 Gma14g00571 14 5467698 5468531 ECH
Gma07g01266 07 16428585 16429977 Gma14g00571 14 5467698 5468531 ECH
Gma14g00571 14 5467698 5468531 Gma14g00571 14 5467698 5468531 ECH
Gma14g00571 14 5467698 5468531 Gma02g02363 02 49699357 49700217 GST
Gma18g00338 18 2841110 2842004 Gma14g00571 14 5467698 5468531 PCT
Gma11g02239 11 37715904 37716948 Gma14g00571 14 5467698 5468531 PCT