Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00570 ATGGCTGGGATTTGCTGTGGAGTTGTTGGAGAAGCCGCCGAGACTTCTTCTCCCATCGAACCCACCTCACGCCCTTCCGCACGCCGGAGTTTGGACCTTTTGCCCTTGAAATACATAGCTGCTGACGTGTCAGTCCCGCCGCTGGAGAACAGCCGGAAGCGCCAGAGGCTGGATAGGCGCGCTTCTCCGGCAAGGGAGTGCGATAACGCGGTTCATAGTTCCAAATCGAAGGTAGTTGAGGTTGTTCCGAATTATTCTTCGAAGAGTCCAACGTTGGACTCCACAAGTCCAACAGTTGTCGAGGAGTATCCGAGGTATGGGGTAACGTCCGTTTGTGGAAGGAGGAGGGACATGGAAGACGCCGTTTCGGTCCGTCCATCGTTTTGCCAAGAAACTTTATCTCATGATAAAAAATTAGGGTTTCATTTCTTCGCTGTTTTCGACGGCCACGGTTGCTCACATGTTGCGACGATGTGCAAGGAGAGGTTACACGAGATAGTGAAGGAAGAGGTTCACCAAGCGAAGGAGAATTTGGAATGGGAATCAACGATGAAAAAGTGTTTCGCGCGCATGGACGAAGAGGTTTTAAGGTGGAGTCAGAACAACGAGACTCCAAGTTGCAGGTGCGAGCTTCAGACCCCGCACTGCGACGCTGTGGGCTCCACCGCAGTTGTGGCCGTCGTCACGCCGGAGAAAATCATCGTGGCAAACTGCGGCGACTCACGCGCCGTGCTTTGCCGCAACAACGTAGCCGTCCCACTCTCCGACGATCACAAGCCGGACCGACCCGACGAGTTGCTTCGGATCCAAGTAGCGGGAGGGCGCGTGATATATTGGGACGGACCTAGAGTGCTTGGGGTGTTGGCTATGTCCAGAGCCATAGGGGACAATTATCTGAAGCCGTATGTAATTTCGGAACCGGAGGTAACGGTAACTGAGCGTAGTGAGGAGGATGAGTGTTTGATATTAGGGAGTGATGGGCTATGGGACACAGTGCAAAACGACATCGCATGCAAAGTGGTGCGGATGTGTCTGAACGCGCAGAAGCCGCCATCGCCGCCCTCGTCTCCGAGGAGGGAGATGGCGGTGGACTGCTCCGACAAGGCTTGCTCCAACGCCTCCATTCTGCTGACCAAATTGGCGTTGGTTAGGCAGAGTTCCGACAATGTGAGCGTGGTGGTGGTTGATTTGAGGAGAACCTAA 1203 0.5428 MAGICCGVVGEAAETSSPIEPTSRPSARRSLDLLPLKYIAADVSVPPLENSRKRQRLDRRASPARECDNAVHSSKSKVVEVVPNYSSKSPTLDSTSPTVVEEYPRYGVTSVCGRRRDMEDAVSVRPSFCQETLSHDKKLGFHFFAVFDGHGCSHVATMCKERLHEIVKEEVHQAKENLEWESTMKKCFARMDEEVLRWSQNNETPSCRCELQTPHCDAVGSTAVVAVVTPEKIIVANCGDSRAVLCRNNVAVPLSDDHKPDRPDELLRIQVAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERSEEDECLILGSDGLWDTVQNDIACKVVRMCLNAQKPPSPPSSPRREMAVDCSDKACSNASILLTKLALVRQSSDNVSVVVVDLRRT 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00570 400 MobiDBLite consensus disorder prediction 49 72 - -
Gma14g00570 400 Pfam Protein phosphatase 2C 105 371 IPR001932 -
Gma14g00570 400 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 24 399 - -
Gma14g00570 400 SMART PP2C_4 95 395 IPR001932 -
Gma14g00570 400 Gene3D - 98 400 IPR036457 -
Gma14g00570 400 SMART PP2C_SIG_2 125 397 IPR001932 -
Gma14g00570 400 CDD PP2Cc 105 346 IPR001932 -
Gma14g00570 400 SUPERFAMILY PP2C-like 92 398 IPR036457 -
Gma14g00570 400 ProSitePatterns PPM-type phosphatase domain signature. 143 151 IPR000222 GO:0043169
Gma14g00570 400 ProSiteProfiles PPM-type phosphatase domain profile. 105 397 IPR001932 -
Gma14g00570 400 PANTHER ALPHABET, ISOFORM E-RELATED 24 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00570 Gma-Chr14 5455399 5457703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00570 1 345 PP2C-type Phosphatase Gene Family AT3G11410 60.615 2.57e-142 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00570 K14497 - gmx:100781388 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02364 02 49716591 49718694 Gma14g00570 14 5455399 5457703 ECH
Gma14g00570 14 5455399 5457703 Gma14g00570 14 5455399 5457703 ECH
Gma14g00570 14 5455399 5457703 Gma02g02364 02 49716591 49718694 GST
Gma18g00330 18 2757841 2760096 Gma14g00570 14 5455399 5457703 PCT
Gma11g02250 11 37825143 37827221 Gma14g00570 14 5455399 5457703 PCT
Gma14g00570 14 5455399 5457703 Gma18g00330 18 2757841 2760096 PCT
Gma14g00570 14 5455399 5457703 Gma11g02250 11 37825143 37827221 PCT