Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00563 ATGGCCATCAATAATGGTGGGGGAAGCGAGGAAGGGGCATTGCAGACAGTGCTTTACATGTGGGGCTACCTTCCCGGAGCTCTGCCGCAGAGGACGCCCCTCTTGACGCCGGTTGCCGTTAGGGTTCCGCCGTGTGATTACTCTTGGAATGATGTTTGCGGCGGTGGCTGTGGATTCGCTATTGCTATATCTGAATCGGGGAAGCTCATCACATGGGGCTCAACAGATGATCTAGGCCAAAGCTATGTGACTTCTGGCAAGCATGGGGAAACTCCAGAGCCTTTCCCTCTTCCAACGGAAGCCTCTATTGTAAAAGCTGCAGCAGGATGGGCTCATTGTGTTGCTGTAACAGCAGAACATGGAGCAGTTTATACATGGGGATGGAAAGAATGTATTCCCTCTGGGAGGGTATTTGGTGAACCATCAACAGGGGTAAGTCTTGAGAAAGATGTGCCAGGAAGGCATAGTCAAGTGTCCACAGAGCAAGTGAGCCCTCGTTCTCAAGGCTCAAGATCTACTGGAGGTACTGCCTCCAGTAACAGTGGAGAAGAAAGTACAAAGCGAAGGAGAGTGTCTTCAGCAAAGCAAACAGCTGAAAGCTCGTCATCCAGTGATGATAGTCTGACAGCATTCCCGTGTCTAGTCACACTAAATCCAGGGATAAGGATAGCTAGTGTTGCTGCTGGTGGACGTCATACGCTAGCGTTATCAGTTTCAGATACAGGACTGGTGTGGGCTTGGGGCTATGGAGGTGAAGGGCAGCTTGGTTTGGGTTCCAGAATACGCATGGTTTCCACTCCTCATCTTGTTCCTTGTATTGATTCCTCTTATTATAGTAAAGATAGATCTGCTACACTGGCTCGAGGAAACATGGATTCAGAGGGACAAACTTTTAGAGTTCCTGGAAGTTATATAAAGAGAATTGCTTGCGGAGGTCGACATAGTGCAGTAATTACAGATGCTGGAGCCTTGCTTACTTTTGGTTGGGGACTCTATGGACAGTGTGGGCAAGGAATTACCGATGATGAACTAAGCCCAACTTGTGTATCTTCCATATTGGGTATCCACATAGAGAGAGTTGCTGCAGGACTGTGGCATACAGTCTGTACATCTGCTGATGGTGATGTGTATGCATTTGGTGAGAATCAGTTTGGGCAGTTGGGAACTGGTGCTGATCAAGCTGAGACTCTACCAAGACTACTGGATTCTCCGAGTTTGGATAATTTGCGTGCAAAGAATATATCTTGCGGTGCTCGCCACACTGCTTTAGTAACAGAGGGTGGAAAAGTTTTCTGCTGGGGATGGAACAAATATGGACAGCTGGGCCTCGGTGACGTAATTGACCGAAACATTCCTTCTGAAGTCATCATTGAAGGTTGTGTACCCAAAAATGTTGCTTGTGGTTGGTGGCATACTCTTCTTCTGGCCGAGTCCCCCACTTGA 1443 0.4823 MAINNGGGSEEGALQTVLYMWGYLPGALPQRTPLLTPVAVRVPPCDYSWNDVCGGGCGFAIAISESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCVAVTAEHGAVYTWGWKECIPSGRVFGEPSTGVSLEKDVPGRHSQVSTEQVSPRSQGSRSTGGTASSNSGEESTKRRRVSSAKQTAESSSSSDDSLTAFPCLVTLNPGIRIASVAAGGRHTLALSVSDTGLVWAWGYGGEGQLGLGSRIRMVSTPHLVPCIDSSYYSKDRSATLARGNMDSEGQTFRVPGSYIKRIACGGRHSAVITDAGALLTFGWGLYGQCGQGITDDELSPTCVSSILGIHIERVAAGLWHTVCTSADGDVYAFGENQFGQLGTGADQAETLPRLLDSPSLDNLRAKNISCGARHTALVTEGGKVFCWGWNKYGQLGLGDVIDRNIPSEVIIEGCVPKNVACGWWHTLLLAESPT 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00563 480 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 322 373 IPR000408 -
Gma14g00563 480 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 308 318 IPR000408 -
Gma14g00563 480 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 67 119 IPR000408 -
Gma14g00563 480 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 374 427 IPR000408 -
Gma14g00563 480 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 428 478 IPR000408 -
Gma14g00563 480 Pfam Regulator of chromosome condensation (RCC1) repeat 242 318 IPR000408 -
Gma14g00563 480 Pfam Regulator of chromosome condensation (RCC1) repeat 322 369 IPR000408 -
Gma14g00563 480 Pfam Regulator of chromosome condensation (RCC1) repeat 428 475 IPR000408 -
Gma14g00563 480 Pfam Regulator of chromosome condensation (RCC1) repeat 373 423 IPR000408 -
Gma14g00563 480 MobiDBLite consensus disorder prediction 156 182 - -
Gma14g00563 480 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 15 480 - -
Gma14g00563 480 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 242 321 IPR000408 -
Gma14g00563 480 PANTHER REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN 15 480 - -
Gma14g00563 480 Gene3D - 6 169 IPR009091 -
Gma14g00563 480 PRINTS Chromosome condensation regulator RCC1 signature 465 480 IPR000408 -
Gma14g00563 480 PRINTS Chromosome condensation regulator RCC1 signature 323 339 IPR000408 -
Gma14g00563 480 PRINTS Chromosome condensation regulator RCC1 signature 357 370 IPR000408 -
Gma14g00563 480 PRINTS Chromosome condensation regulator RCC1 signature 376 392 IPR000408 -
Gma14g00563 480 PRINTS Chromosome condensation regulator RCC1 signature 428 444 IPR000408 -
Gma14g00563 480 SUPERFAMILY RCC1/BLIP-II 30 478 IPR009091 -
Gma14g00563 480 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 414 424 IPR000408 -
Gma14g00563 480 MobiDBLite consensus disorder prediction 143 207 - -
Gma14g00563 480 Gene3D - 283 480 IPR009091 -
Gma14g00563 480 Gene3D - 196 282 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00563 Gma-Chr14 5405263 5410464 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00563 - - gmx:100778718 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02368 02 49759522 49764761 Gma14g00563 14 5405263 5410464 ECH
Gma14g00563 14 5405263 5410464 Gma14g00563 14 5405263 5410464 ECH
Gma14g00563 14 5405263 5410464 Gma02g02368 02 49759522 49764761 GST
Gma18g00326 18 2703345 2713294 Gma14g00563 14 5405263 5410464 PCT
Gma11g02255 11 37868249 37874616 Gma14g00563 14 5405263 5410464 PCT
Gma14g00563 14 5405263 5410464 Gma18g00326 18 2703345 2713294 PCT
Gma14g00563 14 5405263 5410464 Gma11g02255 11 37868249 37874616 PCT