Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00553 ATGGCTCCTTCTTCAGATGTTAACCATCTTTCACATCCTTGTATCTATGGGGATTATAGTTCTTCTCGCTCAGAAAGAAAGTCTGGTTTCATGAAATGGCTTAATAAGCTTTTCAGAGGTGGGCCCAATAGAGGAAGGGGTGGTCGCCACCTGCATGAGCCAGCAGAGGAAAGCAGAGTTTGGGGTGCTCCATCTAGAGCGTTGGATGATCGTGCTAGAGCTCAGAAGGAGAAAGAGGATCTAGGCCATGCAATGGCACTTTCTTCAGCCGAAGATTTAAAGAGACCAAACGCTCATCAAGGATATAATTGGGGAGAAGACACTGGTGATGATTACTCGAAGGCACCTCGTGATACCCTTAACTCATCTGCACACCCTCCCTTTGCCCCTACACCATTTTATCCCCACGAATATAGAAGAATATGTGGTGGCTGCAACCAAGAGATAATGTATGGAAATTGTTTGGGCTGCATGGATACTTATTTTCACCCAAATTGTTTTCGCTGTCACTCTTGTGGTTACCCCATTACAGAGCGTGAGTTTTCCTTGTCAGGGAAGCATCCATATCACAAGTCATGTTTTAAAGAGTTGAATCATCCAAAATGTGAAGTTTGCTTCCAATTTattcctataaatgctgctggtttgattgagtataggtgccaccccttttggtcccaaaagtattgtccatctcatgaatatgataataCAGCTCGCTGCTGTAGTTGTGAAAGATTGGAGCCTTTGAACATAAAATACTATAGACTAGAAGATGGACGGAGTTTGTGTTTAGAGTGCATGGAATCTGCTATAATGGATACCGGTGATTGCCAGCCCCTTTACCATTCTATCAGAGATTACTATGAAGGAATGCAGATGAGAATAGATCAACAAATTCCCATGCTTCTAGTTGAGAGAGAAGCACTTAATGAAGCTATTGTAGGGGAGAAAAATGGTTTTCATCACTTACCAGAAACAAGAGGCTTATGCCTTTCAGAAGAGCAGACTGTCACCAGTATACATAGAAGACCAAGAATTGGAGGCCATCGACTAATCGGGATGCGAACTCAACCTCAAAAACTGACTAGAAAATGTGAAGTTACAGCAATTCTTGTTCTATATGGTCTTCCTAGGTTACTCACAGGTGCTATACTTGCCCATGAGTTGATGCATGCATGGCTACGCCTTAATGGTTATCGCAACCTTAATCCTGAAGTAGAGGAAGGCATTTGTCAGGTTCTTTCGTATATGTGGCTTGAGTCAGAAGTAATGCCTAGCTTTCAAAACATGCCATCAACATCCACAAGTGCTGCCTCTTCCTACTCCTCCTCAAAGAAGGGTGCAAAGTCTCATGTTGAAAATAAATTGGGTGAATTTTTCAAGAATCAGATTGCCAATGATTCTTCCCCAGCTTATGGTGGTGGCTTTAGAGCTGCTAATGAAGCTGTTAATAGATATGGTTTGCGTAGAACACTTGACCATATTCATTGGACTGGTTTTTTCCCAGTGTAA 1515 0.4007 MAPSSDVNHLSHPCIYGDYSSSRSERKSGFMKWLNKLFRGGPNRGRGGRHLHEPAEESRVWGAPSRALDDRARAQKEKEDLGHAMALSSAEDLKRPNAHQGYNWGEDTGDDYSKAPRDTLNSSAHPPFAPTPFYPHEYRRICGGCNQEIMYGNCLGCMDTYFHPNCFRCHSCGYPITEREFSLSGKHPYHKSCFKELNHPKCEVCFQFIPINAAGLIEYRCHPFWSQKYCPSHEYDNTARCCSCERLEPLNIKYYRLEDGRSLCLECMESAIMDTGDCQPLYHSIRDYYEGMQMRIDQQIPMLLVEREALNEAIVGEKNGFHHLPETRGLCLSEEQTVTSIHRRPRIGGHRLIGMRTQPQKLTRKCEVTAILVLYGLPRLLTGAILAHELMHAWLRLNGYRNLNPEVEEGICQVLSYMWLESEVMPSFQNMPSTSTSAASSYSSSKKGAKSHVENKLGEFFKNQIANDSSPAYGGGFRAANEAVNRYGLRRTLDHIHWTGFFPV 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00553 504 Pfam LIM domain 142 195 IPR001781 -
Gma14g00553 504 PANTHER TRANSCRIPTION FACTOR INTERACTOR AND REGULATOR LIM FAMILY-RELATED 20 504 - -
Gma14g00553 504 ProSiteProfiles LIM domain profile. 140 200 IPR001781 -
Gma14g00553 504 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 136 167 - -
Gma14g00553 504 CDD LIM_DA1 142 194 - -
Gma14g00553 504 PANTHER PROTEIN DA1-RELATED 2 20 504 IPR045218 -
Gma14g00553 504 MobiDBLite consensus disorder prediction 1 23 - -
Gma14g00553 504 SMART lim_4 141 193 IPR001781 -
Gma14g00553 504 ProSitePatterns LIM zinc-binding domain signature. 142 176 IPR001781 -
Gma14g00553 504 MobiDBLite consensus disorder prediction 46 85 - -
Gma14g00553 504 MobiDBLite consensus disorder prediction 41 126 - -
Gma14g00553 504 Pfam Protein DA1 291 498 IPR022087 -
Gma14g00553 504 Gene3D Cysteine Rich Protein 129 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00553 Gma-Chr14 5320587 5325470 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma14g00553 DA1-like 6.9e-100 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00553 - - gmx:100784976 1057.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00553 14 5320587 5325470 Gma14g00553 14 5320587 5325470 ECH