Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00537 ATGTTGGTTACTGAGGACAAGTCTCATGTCGTTGTTGCCATAGACAATGATGGCTGTTGTCACCGGAGCTCTGCCGGCGGCGAGGGTTTCGCCGACGCCGGCGAACGGTCGGATGAGGAGCAAAGGTCCTCTCATGATTCTGGCACCGAGATTGTGGGAGTGTGTGAGAAGGAGAGAGGATCAGAGTGTTCTGTGGAGGTGGATCTGGTTCCTGAGGTTAAGGTGCATTTGGCCAATGTGGAGAGGGATTGTAGGATTTGCCATCTCAGCATGGATATGACCAACCATGAATCTGGGACTTCCATTGAATTGGGATGCTCTTGCAAGGATGATTTGGCTGCTGCTCACAAGCAGTGTGCTGAGGTTTGGTTCAAGATCAAGGGAAACAAAACTTGTGAAATCTGTGGATCGGTTGCACGCAATGTAGCTGGAGCTATTGAAATTCAAATGACAGAACAGTGGAATGAGGCAAATGATGCTTCCACGGCCCCACCATCTGGACCAGCACCACCCACAGAAACTCGAAATTTCTGGCAGGGTCACCGTTTTTTGAATTTCCTGCTAGCCTGTATGGTCTTTGCCTTTGTCATATCCTGGCTTTTTCACTTTAATGTGCCCTCTTGA 624 0.4936 MLVTEDKSHVVVAIDNDGCCHRSSAGGEGFADAGERSDEEQRSSHDSGTEIVGVCEKERGSECSVEVDLVPEVKVHLANVERDCRICHLSMDMTNHESGTSIELGCSCKDDLAAAHKQCAEVWFKIKGNKTCEICGSVARNVAGAIEIQMTEQWNEANDASTAPPSGPAPPTETRNFWQGHRFLNFLLACMVFAFVISWLFHFNVPS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00537 207 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 144 IPR013083 -
Gma14g00537 207 MobiDBLite consensus disorder prediction 28 50 - -
Gma14g00537 207 MobiDBLite consensus disorder prediction 32 50 - -
Gma14g00537 207 ProSiteProfiles Zinc finger RING-CH-type profile. 76 142 IPR011016 GO:0008270
Gma14g00537 207 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 36 207 - -
Gma14g00537 207 Pfam RING-variant domain 84 135 IPR011016 GO:0008270
Gma14g00537 207 SMART ringv_2 83 136 IPR011016 GO:0008270
Gma14g00537 207 PANTHER ZINC FINGER, RING-CH-TYPE 36 207 - -
Gma14g00537 207 SUPERFAMILY RING/U-box 81 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00537 Gma-Chr14 5155896 5160740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00537 15 207 C3H Transcription Factor Family AT5G05830 58.586 3.54e-70 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00537 - - gmx:100818979 429.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02389 02 49959951 49965007 Gma14g00537 14 5155896 5160740 ECH
Gma03g00657 03 20389571 20393148 Gma14g00537 14 5155896 5160740 ECH
Gma18g01777 18 49518290 49520867 Gma14g00537 14 5155896 5160740 ECH
Gma07g01308 07 17229101 17233526 Gma14g00537 14 5155896 5160740 ECH
Gma14g00537 14 5155896 5160740 Gma14g00537 14 5155896 5160740 ECH
Gma14g00537 14 5155896 5160740 Gma02g02389 02 49959951 49965007 GST