Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00536 ATGACCGAAGAAGACCGCTCCGCCCAGGAAACCGTCCACAATGGCGTCGCCTCGACGGAGCTAGGCGGCGAGGAGATGGACATCGCTGAGGTGACGGCCGCCGGAAGAGTGAAGGGACCGTGGTCTCCAGAGGAGGACGCGCTGCTGAGCCGATTGGTGGCGCAGTTCGGTGCAAGGAACTGGAGCATGATCGCGCGGGGAGTGCCGGGACGCTCCGGCAAGTCGTGCCGGCTCCGGTGGTGTAATCAGCTGGACCCTTGCGTGAAACGCAAGCCCTTCACTGAGGAAGAGGATAGCATCATAGTTTCAGCCCATGCAATCCATGGAAACAAATGGGCAGCAATTGCTAGGCTTCTTCCAGGAAGAACAGATAATGCAATCAAGAATCACTGGAATTCTACACTGAAGCGCAGGTGTATGGAAATGGGAAGATATGTCCCAGCACATGCTGATGTGATGGAAGATGGTACTGGCAGCTTTGATAAAACAAAAGCATCCTCTGAAGAAACCATGTCAATTGGGGATATCAATTCAAAGAATCCTGCTGAAGTCAGAAATGTCATGATGGATAATGAAAATAAACCTCCAACAAAAGATGATGCTAAAGTGGAGGAACATCCTACTCTTCATCGACCAGTAGCACGTGTTAGTGCATTTAGTGTTTATAACACTCCAGGAAGGTCAACAATGGGATCATGTTCAAAGATGTTCCCAAGGCAGAGCCCTTTGATCCAATCCCCCAAACCAGACGTAGGATCCTGCAAGTTATTTGATGATATTGATTGTGAGCCCATGGTTCCATCACAATGTGGTCATGGCTGCTGCACAGGAGACTCGAGGGAAAGCCATTCGCATGGTTCACTTCTAGGTCCTGAGTTTGTTGACTATTTGGAGTCACCTTCCTCTAGTCATGCATTTATTTCTATAGCTACAGACTTGAACAATATAGCTTGGATCAAGAGTGGCCTTGAGAATTGTAGTACTGGAGTAACTGAGAATACTGCAAACTTGACAGCATCTCGAGGAGTTGCCAGTGCTTTGCAAACAAACTTCTTAGGACAAGATCTAAAGAATGGCTACGGGCAATTTGAGGAGGGACATGGCATGTTTTTGGGTGCGATGCAAGAAGTGTTGTCAACAAAGATGGCTAGGCAACATTATGCAATGCCTGCGGAAGTTTAA 1182 0.4822 MTEEDRSAQETVHNGVASTELGGEEMDIAEVTAAGRVKGPWSPEEDALLSRLVAQFGARNWSMIARGVPGRSGKSCRLRWCNQLDPCVKRKPFTEEEDSIIVSAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLKRRCMEMGRYVPAHADVMEDGTGSFDKTKASSEETMSIGDINSKNPAEVRNVMMDNENKPPTKDDAKVEEHPTLHRPVARVSAFSVYNTPGRSTMGSCSKMFPRQSPLIQSPKPDVGSCKLFDDIDCEPMVPSQCGHGCCTGDSRESHSHGSLLGPEFVDYLESPSSSHAFISIATDLNNIAWIKSGLENCSTGVTENTANLTASRGVASALQTNFLGQDLKNGYGQFEEGHGMFLGAMQEVLSTKMARQHYAMPAEV 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00536 393 MobiDBLite consensus disorder prediction 1 25 - -
Gma14g00536 393 Gene3D - 91 151 - -
Gma14g00536 393 Gene3D - 37 89 - -
Gma14g00536 393 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 139 IPR017930 -
Gma14g00536 393 CDD SANT 92 135 IPR001005 -
Gma14g00536 393 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 84 IPR017930 -
Gma14g00536 393 ProSiteProfiles Myb-like domain profile. 33 84 IPR001005 -
Gma14g00536 393 ProSiteProfiles Myb-like domain profile. 85 135 IPR001005 -
Gma14g00536 393 MobiDBLite consensus disorder prediction 157 177 - -
Gma14g00536 393 MobiDBLite consensus disorder prediction 163 177 - -
Gma14g00536 393 PANTHER MYB TRANSCRIPTION FACTOR-LIKE PROTEIN 13 326 - -
Gma14g00536 393 CDD SANT 40 82 IPR001005 -
Gma14g00536 393 Pfam Myb-like DNA-binding domain 38 84 IPR001005 -
Gma14g00536 393 Pfam Myb-like DNA-binding domain 90 134 IPR001005 -
Gma14g00536 393 PANTHER MYB PROTEIN-RELATED 13 326 - -
Gma14g00536 393 SUPERFAMILY Homeodomain-like 35 131 IPR009057 -
Gma14g00536 393 SMART sant 89 137 IPR001005 -
Gma14g00536 393 SMART sant 37 86 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00536 Gma-Chr14 5147968 5152610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00536 36 325 MYB Transcription Factor Family AT3G55730 51.456 7.41e-100 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma14g00536 Myb_DNA-binding 3.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00536 K09422 - gmx:100781228 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g02390 02 49973607 49977259 Gma14g00536 14 5147968 5152610 ECH
Gma14g00536 14 5147968 5152610 Gma14g00536 14 5147968 5152610 ECH