Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00531 ATGTCTGCTTATGGCCATCAAATGGAGCAGATGTATTCTGCACGGAGTCTCTCAGGTGGTGGTTCTGAGTTGAGGAGGAGCAGTTTTGTGTTGGAATCAGGATTCTATATCACATCCTTTGTCGCCACCATCTTTGTTGCTGCATTAGCCGCTGCAGGACTTCTATTGATTACTTTATTGGTTTCACTTGCAATGATGCTGCAATCTTGTCAAAGTAGCCATGCTGGAATCATTGAGCTTCAGAATATAAATGATCAGTACAATTATTGCAAGGTTTATTCTCTGCATGTTAAGCTCAATAACTTGGAAGGACATAATTTTCCTAGCCTCTGCAAGGACCTGGCTATGAAGTATATCAAGGGAGGTCAATATGCTAGAGACTTGGATTCAACCAAGTCTGTGATTGAGGATTACTTCAACAGTGTTAGACCATCAGATGATGGTCTTGATGTGGTGTTGATAGACATAGATGGCATCTTTCCACCAAATCCCCATTCTTCCAATTTATTTAAAAGCAGCATTAACAATTTTGTATTAGAGGCAAAGAATTTAAAGAGGATGCTTGTTTTAAGATTATACATGAACCTTCAAGCTGGTGGGTGGTCCATAATTTTGTTATCAAGAGAGCATGGAACACGCCAAAATGTCACCATCAGTCATCTTCTCTCCGCTGGATTTAGAGATTGGTCTTCCTTGATGATGAGTTTTTGCAGTGAAGAAGATGAAGAATCTACCAAAGGGAATGAGTATTTTTCTAGGCAAAGGAATGTGATACAGACGAAGGGCTTCCGCATAAAAAGTATCATGAGCAGTCAAATGGATGCTTTGGCTGTTGCAGATAGAGGAATAAGATTTGTTTTGCTTCCGGACCCTATATTTGACAATTTCTCTGCAGCTAAATTGACCAATAGTTTGGTGCACTTAGATCTAAAAGCTAGAAAGATGTCTTTTATTGGCACTCAACAAAAGTGCGAGGCTTGTGACAAAACAGTGTACCCCGTTGATCAGCTTTCTGCTGATGGCACTGCTTATCACAAAGCATGCTTCAAGTGCTCTCATTGCAAAGGAACCTTGAAGCTCAGCAACTATTCCTCCATGGAAGGTGTTCTATACTGTAAGCCTCATTATGAGCAACTCTTCAAGGAGACAGGATCTTTCAAGAAGAACTTCCAGTCACCTGCTAAGCAAGCTGTCAAAACAACTCCTGAGCTGACAAGGTCTCCTAGTAAAGCTGCTAGCATgttttctgggacccaagaaaagtgtgctacatgtggcaaaactgcttatcctttggagaagGTAACAGTGGAAGGTCAGGCCTATCACAAATCTTGTTTCAAATGTTCACATGGCAGCTGTCCCATAACTCCATCCAACTATGCAGCCCTGGAGGGCGTTTTGTATTGCAAGCACCATTTTTCCCAGCTTTTTAAGGAGAAAGGGAGCTATAATCATCTTATTAAATCTGCATCAATCAAACGGGAAGCAAACTCTGTTCCACAAGCTTGA 1512 0.3948 MSAYGHQMEQMYSARSLSGGGSELRRSSFVLESGFYITSFVATIFVAALAAAGLLLITLLVSLAMMLQSCQSSHAGIIELQNINDQYNYCKVYSLHVKLNNLEGHNFPSLCKDLAMKYIKGGQYARDLDSTKSVIEDYFNSVRPSDDGLDVVLIDIDGIFPPNPHSSNLFKSSINNFVLEAKNLKRMLVLRLYMNLQAGGWSIILLSREHGTRQNVTISHLLSAGFRDWSSLMMSFCSEEDEESTKGNEYFSRQRNVIQTKGFRIKSIMSSQMDALAVADRGIRFVLLPDPIFDNFSAAKLTNSLVHLDLKARKMSFIGTQQKCEACDKTVYPVDQLSADGTAYHKACFKCSHCKGTLKLSNYSSMEGVLYCKPHYEQLFKETGSFKKNFQSPAKQAVKTTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVEGQAYHKSCFKCSHGSCPITPSNYAALEGVLYCKHHFSQLFKEKGSYNHLIKSASIKREANSVPQA 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00531 503 CDD LIM1_SF3 320 382 - -
Gma14g00531 503 ProSitePatterns LIM zinc-binding domain signature. 324 358 IPR001781 -
Gma14g00531 503 ProSiteProfiles LIM domain profile. 420 480 IPR001781 -
Gma14g00531 503 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 85 293 IPR005519 -
Gma14g00531 503 Gene3D Cysteine Rich Protein 416 486 - -
Gma14g00531 503 Gene3D Cysteine Rich Protein 318 388 - -
Gma14g00531 503 SMART lim_4 421 473 IPR001781 -
Gma14g00531 503 SMART lim_4 323 375 IPR001781 -
Gma14g00531 503 CDD LIM2_SF3 422 482 - -
Gma14g00531 503 Gene3D - 85 298 IPR023214 -
Gma14g00531 503 Pfam LIM domain 324 379 IPR001781 -
Gma14g00531 503 Pfam LIM domain 422 477 IPR001781 -
Gma14g00531 503 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 350 390 - -
Gma14g00531 503 ProSiteProfiles LIM domain profile. 322 382 IPR001781 -
Gma14g00531 503 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 316 349 - -
Gma14g00531 503 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 23 299 - -
Gma14g00531 503 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 23 299 - -
Gma14g00531 503 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 448 487 - -
Gma14g00531 503 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 414 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00531 Gma-Chr14 5095040 5102120 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LIM Gma14g00531 Acid_phosphat_B 2.2e-12 CL0137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00531 K09377 - gmx:100802632 537.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00531 14 5095040 5102120 Gma14g00531 14 5095040 5102120 ECH
Gma14g00531 14 5095040 5102120 Gma02g02398 02 50028980 50031362 GST
Gma18g00284 18 2368104 2370332 Gma14g00531 14 5095040 5102120 PCT
Gma11g02288 11 38253838 38256324 Gma14g00531 14 5095040 5102120 PCT
Gma14g00531 14 5095040 5102120 Gma18g00284 18 2368104 2370332 PCT
Gma14g00531 14 5095040 5102120 Gma11g02288 11 38253838 38256324 PCT