Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00516 ATGGCTTCCTCATACCGTGACCGCACGTCGGAGTTCCGGTTATTATTGGAGACTCTGAAGAAGATCGGAAGTCCGGTGCAACCCGAGAATGCTCCTTCGACCTCTCATGGCGAGTCGTATTCGAGATCCGAATTCAACCGAAAGGCCTCGCGTATCGGGTTGGGGATCCACGAGACCTCGCAGAAGATCGCGAGGCTCACGCAGCTGGCGAGGAAATCGTCCATGTTCAACGATCCCGCAGTGGAGATTCAGGAGCTGACTGTTCTGATCAAGAACGAGATCACGGCGCTCAACTCGGCTCTCTTCGATTTGCAAACCGTTCAGAACACGGATATGGCTGACGGCGGTTACTCGCAGGATACGATTGTGCATTCCACCGCGGTTTGTGATGACTTGAAGAGCAAACTCATGGGAGCCACCAAACACCTTCAAGATGTCTTAACTGCTAGGACAGAGAATATAAAGGCTCACGAGAACAGGAAGCAGATATTTTCCAAGAACGCATCAAGAGAGAATCCTTTGCAGCATCAGCCAAAGCCAACTACTGAGCCGCCACCTTGGTCAAATTCATCGAATGCATCTGAGAGTTTGCATCAAGAATTGGCATTACCGTCAAATGGAGCTCCTGTTGGCAATCAACTAAGACGAAGGTTGGCTGTGGACAGCACTCCATCCCAGCAAATGGAAATGTCTATGGTACAGCAGGTTGTGCCTCGGCATGACAACTATGCTCAAAGTCGGGCAACTGCTCTGCACAATGTGGAATCTACTATCACTGAGCTTAGTGGGATTTTCTCACATTTAGCTACAATGGTTGCCCATCAAGGGGAGCTTGCTATCAGGATTGATGACAATATGGATGAGTCATCGGCAAATGTTGAAGGAGCTCACAGTTCTTTATTGAGGCATCTCAACCGAATATCATCAAATAGTTTCACTTCGTGGCTTACTTGGATTTGTCTTCGTTCTTCTGTGGAGGCAAAAATACAAGAGCAGCTAAATGTGCGGATGTATTCTATTTGA 1023 0.4819 MASSYRDRTSEFRLLLETLKKIGSPVQPENAPSTSHGESYSRSEFNRKASRIGLGIHETSQKIARLTQLARKSSMFNDPAVEIQELTVLIKNEITALNSALFDLQTVQNTDMADGGYSQDTIVHSTAVCDDLKSKLMGATKHLQDVLTARTENIKAHENRKQIFSKNASRENPLQHQPKPTTEPPPWSNSSNASESLHQELALPSNGAPVGNQLRRRLAVDSTPSQQMEMSMVQQVVPRHDNYAQSRATALHNVESTITELSGIFSHLATMVAHQGELAIRIDDNMDESSANVEGAHSSLLRHLNRISSNSFTSWLTWICLRSSVEAKIQEQLNVRMYSI 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00516 340 MobiDBLite consensus disorder prediction 157 198 - -
Gma14g00516 340 Gene3D - 38 296 - -
Gma14g00516 340 SUPERFAMILY t-snare proteins 41 296 IPR010989 GO:0016020|GO:0016192
Gma14g00516 340 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 4 21 IPR021538 -
Gma14g00516 340 PANTHER SYNTAXIN-31 4 313 - -
Gma14g00516 340 ProSitePatterns Syntaxin / epimorphin family signature. 247 286 IPR006012 GO:0005484|GO:0006886|GO:0016020
Gma14g00516 340 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 241 303 IPR000727 -
Gma14g00516 340 PANTHER SYNTAXIN 4 313 IPR045242 -
Gma14g00516 340 MobiDBLite consensus disorder prediction 23 44 - -
Gma14g00516 340 CDD SNARE_syntaxin5 244 310 - -
Gma14g00516 340 SMART tSNARE_6 236 303 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00516 Gma-Chr14 4934376 4939353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00516 1 316 SNARE and Associated Proteins AT5G05760 64.688 1.09e-130 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00516 K08490 - gmx:100777383 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00516 14 4934376 4939353 Gma14g00516 14 4934376 4939353 ECH
Gma14g00516 14 4934376 4939353 Gma02g02413 02 50197530 50201841 GST