Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00513 ATGGCTCTAACTTTAGTCGTGTTTCTTCTCAGCCTTGTTTCACAAACCATGGTGTCCATGATGCCAGGTACACTGGGTCACGCTTTGAGTGCAGAGAGTGATAAGGTGGCTTTACTTGCTCTGAAGCAAAAGCTTACCAATGGAGTGTTTGATGCTCTTCCAtcatggaacgagtctttgcatttgtgtgagtggcagggtgttacatgcggccaccgccacatgagagtcactgtattgcgcttggaaaatcaaaactggggtggtactcttggaccatccttggcaaatctaaccttcctcagaaagctcattctttccaacatcgacttgcatgcccaaattcctacgcaaattggtcGACTAAAGATGCTGCAGGTTCTTGACTTGAGCCACAACAATCTCCATGGTCAGATTCCTATACAACTTACTAACTGCTCTAAACTTGAGGTAATTAACTTGTTGTACAATAAACTCACCGGAAAACTTCCCTCGTGGTTCGGAACTGGATCCATCACAAAGCTTAGGAAGTTGCTTCTCGGTGCCAATGATCTAGTTGGTACTATAACACCTTCCTTGGGGAATCTTTCATCCCTCCAAAATATTACACTTGCACGAAATCATTTGGAAGGAACTATACCTCATGCTTTGGGTCGGTTATCAAATTTGAAAGAGTTGAATCTTGGTTTAAATCATTTGTCGGGAGTAGTCCCTGATTCCCTTTACAACCTTTCCAATATTCAAATTTTTGTTCTCAGCGTAAACCAGTTATGTGGTACTCTTCCATCAAATATGCAACTTGCTTTTCCAAATCTTCGAGATTTCTTGGTTGGAGGTAACAACTTCAATGGAAGTTTCCCGTCTTCAATATCCAACATCACCGGATTGCACGTGTTTGATATCTCCTTAAATGGTTTTAGCGGATCAATTCCTCCCACTTTCGGAAGCTTAAACAAACTAACGAGGTTTCACATTGCTTATAATAGTTTTGGAAGTGGGAGAGCTCAGGATTTGGATTTCCTTTCCTCATTAACCAATTGTACTCAATTGCACAAACTTATTTTGGAGGGCAATCAATTTGGTGGTGTGTTGCCAGATCTTATTGGAAATTTTTCTGCCAATCTCACTTTGCTTGATATGGGAAAAAATCAAATATCTGGAATGATACCCGAAGGAATTGGAAAGCTAATCGGTTTAACTGAGTTCATTATGGTAGATAATTACCTAGAGGGAACTATTCCAGGTTCAATTGGAAAGCTTAAAAATCTAGTAAGATTCGCCCTGCAAGGAAACTATTTGTCTGGTAATATTCCTACCGCCATTGGCAATCTTACTATGTTGTCTGAACTTTATCTGCGCACAAATAATCTCGAAGGAAGCATTCCATTAAGCCTCAAATACTGCACCCGCATGCAGTCATTTGGTGTTGCTGACAACAACTTGAGTGGTGATATCCCTAATCAAACATTTGGCAATCTAGAAGGCTTGATAAATCTTGACTTGTCCAACAACTCTTTCAATGGTTCCATTCCTTTAGAGTTTGGAAACTTGAAGCACCTTTCCATATTATATTTAAAtgaaaacaagttgtctggtgaaattcccccagaacttagcacttgttccatgttaacagagctcgtgctggagagaaactacttccatggaagcataccttcgttcttgggctctttaagatccctcgaaatcctagacctttctaacaatgacttgtcgagcacaatccctggtgaactacaaaatctgacttttttgaatactttgaacttgtcttttaaccatctttatggtgaagttcctataggaggtgtctttaataacttaacagtagtttcactcattggaaataaggatctctgtggggggatacctcaACTGAAGCTCCCAACTTGCTCTAGGTTGCCGTCAAAGAAACACAAGTGGTCTATTAGAAAGAAACTCATCCTCATCATTGTAATTGAAGTTGGAGGGGTTTTGGTTAGTTTCATAGCATGTATCAGCATCTATTTGTTCAGAAAAAAGCCCAAAACATTATCATCTCCATTGTCTCTACAAAATGGGCGCGTGaaggtttcttacggagagctgcatgaagcaaccaatggattttcttcatccaatttggtagggacaggatgctgtggttctgtatatagaggatctcttctccatttcaaaggaccaattgccgtgaaggtgatgaatcttgaaacaggtggggcatcaaagagtttcgcagctgaatgcaaggctctaggaaagatcatgcaccggaatcttctcactgtcctgacttgttgttcaagtattgactataatgggaaggatttcaaggctattgtttttgagttcatggctaatgggagtctagaaaatttgctgcgtagcaacgaagagctcgagtctagaaatttcaatatcaaccttcaacttatgctaaatattgctcttgatgttgctaatgcattggattatcttcatcatggttctgagcaggccgtagttcactgtgatattaagccaagcaacattcttcttgacgatgactttgttgcccacttgggagattttgggttagcaaggctccttaatgtggtcacgggacattccagcagagatcaggttagttcgtctgcaattaaaggaaccattggatatgtccccccagAATACGGAGCAGGTGTACGAGTATCACCAAAAGGAGATATCTACAGCTACGGAATTCTTCTGTTGGAGATGCTGACGGGAATGAGACCAACAGATAACATGTTTGGTGAGGGTCTTAGCCTACACAAATTCTGTCAGATGGCAATTCCAGAAGAAATAACTGAGATAGTAGATTCACGTTTGCTTGTGCCAATTAATAAAGAAGGAACAAGGGTCATTGAAACCAACATCAGGGAGTGTCTGGTGGCCTTTGCTAGGATTGGAGTTTCATGTTCTGCAGAATTGCCCGTTCCGCGAATGGACATAAAAGATGTGATAATGGAGTTGGAAGCAATCAAACAGAAGCTTCCCCAGTAG 3045 0.2545 MALTLVVFLLSLVSQTMVSMMPGTLGHALSAESDKVALLALKQKLTNGVFDALPSWNESLHLCEWQGVTCGHRHMRVTVLRLENQNWGGTLGPSLANLTFLRKLILSNIDLHAQIPTQIGRLKMLQVLDLSHNNLHGQIPIQLTNCSKLEVINLLYNKLTGKLPSWFGTGSITKLRKLLLGANDLVGTITPSLGNLSSLQNITLARNHLEGTIPHALGRLSNLKELNLGLNHLSGVVPDSLYNLSNIQIFVLSVNQLCGTLPSNMQLAFPNLRDFLVGGNNFNGSFPSSISNITGLHVFDISLNGFSGSIPPTFGSLNKLTRFHIAYNSFGSGRAQDLDFLSSLTNCTQLHKLILEGNQFGGVLPDLIGNFSANLTLLDMGKNQISGMIPEGIGKLIGLTEFIMVDNYLEGTIPGSIGKLKNLVRFALQGNYLSGNIPTAIGNLTMLSELYLRTNNLEGSIPLSLKYCTRMQSFGVADNNLSGDIPNQTFGNLEGLINLDLSNNSFNGSIPLEFGNLKHLSILYLNENKLSGEIPPELSTCSMLTELVLERNYFHGSIPSFLGSLRSLEILDLSNNDLSSTIPGELQNLTFLNTLNLSFNHLYGEVPIGGVFNNLTVVSLIGNKDLCGGIPQLKLPTCSRLPSKKHKWSIRKKLILIIVIEVGGVLVSFIACISIYLFRKKPKTLSSPLSLQNGRVKVSYGELHEATNGFSSSNLVGTGCCGSVYRGSLLHFKGPIAVKVMNLETGGASKSFAAECKALGKIMHRNLLTVLTCCSSIDYNGKDFKAIVFEFMANGSLENLLRSNEELESRNFNINLQLMLNIALDVANALDYLHHGSEQAVVHCDIKPSNILLDDDFVAHLGDFGLARLLNVVTGHSSRDQVSSSAIKGTIGYVPPEYGAGVRVSPKGDIYSYGILLLEMLTGMRPTDNMFGEGLSLHKFCQMAIPEEITEIVDSRLLVPINKEGTRVIETNIRECLVAFARIGVSCSAELPVPRMDIKDVIMELEAIKQKLPQ 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00513 1014 SUPERFAMILY L domain-like 58 345 - -
Gma14g00513 1014 ProSiteProfiles Leucine-rich repeat profile. 567 590 IPR001611 GO:0005515
Gma14g00513 1014 Gene3D Ribonuclease Inhibitor 30 166 IPR032675 -
Gma14g00513 1014 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Gma14g00513 1014 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 18 1013 - -
Gma14g00513 1014 SUPERFAMILY L domain-like 373 628 - -
Gma14g00513 1014 Coils Coil 797 817 - -
Gma14g00513 1014 SMART serkin_6 710 994 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma14g00513 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
Gma14g00513 1014 Gene3D Phosphorylase Kinase; domain 1 691 791 - -
Gma14g00513 1014 Pfam Protein kinase domain 712 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma14g00513 1014 Gene3D Transferase(Phosphotransferase) domain 1 792 1013 - -
Gma14g00513 1014 SMART LRR_typ_2 220 243 IPR003591 -
Gma14g00513 1014 SMART LRR_typ_2 565 588 IPR003591 -
Gma14g00513 1014 SMART LRR_typ_2 122 146 IPR003591 -
Gma14g00513 1014 SMART LRR_typ_2 589 614 IPR003591 -
Gma14g00513 1014 SMART LRR_typ_2 517 541 IPR003591 -
Gma14g00513 1014 ProSiteProfiles Protein kinase domain profile. 710 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma14g00513 1014 PANTHER LRR RECEPTOR-LIKE KINASE 18 1013 - -
Gma14g00513 1014 Pfam Leucine rich repeat 475 530 IPR001611 GO:0005515
Gma14g00513 1014 Pfam Leucine rich repeat 544 602 IPR001611 GO:0005515
Gma14g00513 1014 Pfam Leucine rich repeat 198 257 IPR001611 GO:0005515
Gma14g00513 1014 Gene3D Ribonuclease Inhibitor 338 647 IPR032675 -
Gma14g00513 1014 Gene3D Ribonuclease Inhibitor 167 337 IPR032675 -
Gma14g00513 1014 SUPERFAMILY Protein kinase-like (PK-like) 684 1006 IPR011009 -
Gma14g00513 1014 PRINTS Leucine-rich repeat signature 565 578 - -
Gma14g00513 1014 PRINTS Leucine-rich repeat signature 125 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00513 Gma-Chr14 4888755 4902107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00513 27 1012 Receptor kinase-like Gene Family AT3G47570 43.863 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gma14g00513 Pkinase 1.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00513 - - gsj:114384365 1915.97