Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00493 ATGGAAAGTTACTACTATTCTGGCTGGCCTCTGGCTCAATTCAACTCTGCACCAAACAGTGATCAATTATCTCCTTTTTCAGTCCCAACAACAACACAACAAACACTCCCTCTTGTTGCTACTTCAACTTCTGACCCTGCAGCTGCAGCCTCTCTTCAATTTGGTGAGTTCCCTTCGTGGCCTGCCCCCATTGCAGCAGAAGATAGAGCTGCAAGTGCTTCCAAGAGCCACAGCCAAGCAGAGAAAAGGCGCAGGGACAGGATTAATGCACAGCTTGCAACTCTCAGAAAACTCATTCCCATGTCTGATAAGATGGACAAAGCAACATTACTAGGGAGTGTGGTAGACCATGTGAAAGATCTAAAGCGAAAAGCCATGGATGTCAGCAAAGCCATTACTGTTCCAACTGAAACTGATGAAGTAACAATTGACTACCACCAAGCTCAAGATGAAAGCTACACAAAAAAAGTGAACATATTAAAGGAAAACATCATAATCAAAGCTTCTGTTTGCTGTGATGATCGACCAGAACTGTTCCCTGAGCTCATCCAAGTCCTCAAAGGGTTGAGACTTACAGCAGTTAAAGCTGACATAGCCAGTGTTGGTGGCAGAATCAAAAGCATATTGGTTCTTTGCTCAAAGGATAGTGAAGAGAATAATAGTGTTTGCCTTAGCACTCTCAAACAATCACTTAAATCTGCTGTGAACAAAATTGCTTCGTTATCCGTGGCAACAAATTGTCCCACTAGAAGTAAGAGGCAGAGGTTCTTCTTGCCTTCTCATTACGTACAATAA 795 0.4302 MESYYYSGWPLAQFNSAPNSDQLSPFSVPTTTQQTLPLVATSTSDPAAAASLQFGEFPSWPAPIAAEDRAASASKSHSQAEKRRRDRINAQLATLRKLIPMSDKMDKATLLGSVVDHVKDLKRKAMDVSKAITVPTETDEVTIDYHQAQDESYTKKVNILKENIIIKASVCCDDRPELFPELIQVLKGLRLTAVKADIASVGGRIKSILVLCSKDSEENNSVCLSTLKQSLKSAVNKIASLSVATNCPTRSKRQRFFLPSHYVQ 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00493 264 Gene3D - 66 130 IPR036638 GO:0046983
Gma14g00493 264 CDD bHLH_AtAIG1_like 67 144 - -
Gma14g00493 264 CDD ACT_UUR-ACR-like 169 234 - -
Gma14g00493 264 Pfam Helix-loop-helix DNA-binding domain 75 121 IPR011598 GO:0046983
Gma14g00493 264 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 73 124 IPR036638 GO:0046983
Gma14g00493 264 SMART finulus 78 127 IPR011598 GO:0046983
Gma14g00493 264 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 72 121 IPR011598 GO:0046983
Gma14g00493 264 PANTHER TRANSCRIPTION FACTOR BHLH30 21 263 IPR045847 GO:0003700|GO:0006355
Gma14g00493 264 PANTHER TRANSCRIPTION FACTOR BHLH51 21 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00493 Gma-Chr14 4652794 4654377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00493 14 262 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 42.126 7.57e-52 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma14g00493 HLH 1.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00493 - - gmx:100306102 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00493 14 4652794 4654377 Gma14g00493 14 4652794 4654377 ECH
Gma14g00493 14 4652794 4654377 Gma02g02434 02 50471393 50473066 GST
Gma18g00240 18 1948226 1949532 Gma14g00493 14 4652794 4654377 PCT
Gma11g02335 11 38773231 38774901 Gma14g00493 14 4652794 4654377 PCT
Gma14g00493 14 4652794 4654377 Gma18g00240 18 1948226 1949532 PCT
Gma14g00493 14 4652794 4654377 Gma11g02335 11 38773231 38774901 PCT