Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00492 ATGACGACGATGACCGGCGGCGACAATCGCGTGAAGGGTTCTTGGAGTCCTCAGGAGGATGCGACGTTGCTGAAACTGGTGAATGAGCACGGGGCACGCAACTGGTCCGTCATAAGCGCCGGCATTCCCGGCCGCTCCGGCAAGTCGTGTCGTCTGCGGTGGTGCAACCAGCTGAGTCCGGAAGTGCAACACCGTCCGTTCACTCCGGCGGAAGACAAGATGATCATTAAGGCGCACGCCATTCACGGAAACAAGTGGGCCACCATCTCACGCCTCCTTCCCGGCCGCACCGACAACGCCATCAAGAATCACTGGAACTCCACCCTCCGCCGCCGTCGCACGGCGGAGCAATCCTCCTCCTCGTCGGCGTCTCCGCCGGCCAAACGACCCTCATCCTTGTTTGACACGCTTCACCCTCTAAAAAAGCAGTGCATTGAAAAGGAAAATGAGGAAGAGAGTCCCGTTACGACGTCGTTGAGCCTTTTCCCTCCTGGGGAAAAATCAGAGGAAGAAGAAGAGGAGGAGGAGAAAGAAGAGTTTGCTAATCAAAAGGTTTCGGATCAGAATTACTTTATGCAGATGATGCAGCGGTTGATAGCGGAAGAAGTTAGGAATTACATGGAGACTTTGCGCAATTGCTCCCTTGAGCCTGGGTTAGATCTTCTTTCTCCGACGCTTCCAAAGTAA 687 0.5473 MTTMTGGDNRVKGSWSPQEDATLLKLVNEHGARNWSVISAGIPGRSGKSCRLRWCNQLSPEVQHRPFTPAEDKMIIKAHAIHGNKWATISRLLPGRTDNAIKNHWNSTLRRRRTAEQSSSSSASPPAKRPSSLFDTLHPLKKQCIEKENEEESPVTTSLSLFPPGEKSEEEEEEEEKEEFANQKVSDQNYFMQMMQRLIAEEVRNYMETLRNCSLEPGLDLLSPTLPK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00492 228 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Gma14g00492 228 Pfam Myb-like DNA-binding domain 66 108 IPR001005 -
Gma14g00492 228 Pfam Myb-like DNA-binding domain 12 58 IPR001005 -
Gma14g00492 228 Gene3D - 65 132 - -
Gma14g00492 228 SMART sant 11 60 IPR001005 -
Gma14g00492 228 SMART sant 63 111 IPR001005 -
Gma14g00492 228 CDD SANT 14 56 IPR001005 -
Gma14g00492 228 MobiDBLite consensus disorder prediction 103 186 - -
Gma14g00492 228 PANTHER MYB PROTEIN-RELATED 7 207 - -
Gma14g00492 228 ProSiteProfiles Myb-like domain profile. 7 58 IPR001005 -
Gma14g00492 228 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Gma14g00492 228 MobiDBLite consensus disorder prediction 112 129 - -
Gma14g00492 228 Gene3D - 11 63 - -
Gma14g00492 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Gma14g00492 228 CDD SANT 66 109 IPR001005 -
Gma14g00492 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 58 IPR017930 -
Gma14g00492 228 PANTHER OS01G0850400 PROTEIN 7 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00492 Gma-Chr14 4645482 4646168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00492 10 119 MYB Transcription Factor Family AT4G37260 71.818 2.91e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma14g00492 Myb_DNA-binding 1.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00492 - - gmx:102661292 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00492 14 4645482 4646168 Gma14g00492 14 4645482 4646168 ECH