Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00490 ATGTCGATTCGTGACTCTGAATCACTGAATTGGCACTACGACACTGAACTCGACGACGAAACCCTCGAAATCCGCGGCCGCAAGCTCTTTTTCATCATCGTCCTCTTCTCCATCATTCTCCTCTTCACCGCGCTCTTCGTCTTCGCGCGCCGGATCTGCCGCCGCCGCCACCACCACCACAATGGCCTCCTCCTCCCCGATGCCGTCCCGCCGCCGCAGAACACCGGCCTCGATTCCGCCGCGATCAAGAGGCTACCGATCGTCCTCCACCCGCGGTGCAACCGCGTGGCGGAGGCGGAGTGCTGCATCTGCCTCGGCGCGTTCGCCGACGGAGAGAAGCTGAAGGTTCTTCCAGGGTGCGACCACAGCTTCCATTGCGAGTGCGTGGATAAGTGGCTCACGAATCACTCCAATTGCCCTCTCTGCAGAGCTTCGCTCAAGCTCGATTCTTCTTCCTTCCCCGCGATTTTGATCCAATCGCCACCCGTTAGAACTAGTCTTCCGGTCTGA 510 0.5961 MSIRDSESLNWHYDTELDDETLEIRGRKLFFIIVLFSIILLFTALFVFARRICRRRHHHHNGLLLPDAVPPPQNTGLDSAAIKRLPIVLHPRCNRVAEAECCICLGAFADGEKLKVLPGCDHSFHCECVDKWLTNHSNCPLCRASLKLDSSSFPAILIQSPPVRTSLPV 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00490 169 PANTHER RING-H2 FINGER PROTEIN ATL66 3 153 - -
Gma14g00490 169 Pfam Ring finger domain 100 143 IPR001841 -
Gma14g00490 169 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Gma14g00490 169 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 3 153 IPR044675 -
Gma14g00490 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 148 IPR013083 -
Gma14g00490 169 SUPERFAMILY RING/U-box 81 152 - -
Gma14g00490 169 SMART ring_2 101 142 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00490 Gma-Chr14 4636244 4637050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00490 9 152 C3H Transcription Factor Family AT3G11110 45.890 1.09e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00490 - - gmx:102660969 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00239 18 1937606 1939272 Gma14g00490 14 4636244 4637050 PCT
Gma11g02336 11 38784169 38785681 Gma14g00490 14 4636244 4637050 PCT
Gma14g00490 14 4636244 4637050 Gma18g00239 18 1937606 1939272 PCT
Gma14g00490 14 4636244 4637050 Gma11g02336 11 38784169 38785681 PCT