Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00487 ATGAAGGGTTATGAGCCACGTTCAAGCTCTTCTTGTGCAGCTTGCAAGTTCTTGAAGAGAAGGTGCATACCCAATTGCATATTTGCACCTTACTTTCGCTCTGACGAGTGCAAGAAATTCGCCAAGGTGCACAAGGTGTTCGGGGCAAGCAATGTGAGCAAGATCCTCGTTGAGGTTCCTGAGGAACAGAGAGAGGATACGGTGAATTCGCTTGCTTATGAGGCGGAAGCACGGCTTCGGGACCCGGTTTATGGATGCATTGGTGCCATAGCTCTGCTGCAAAGGAAGATGgtggagcttcaacatgaccttgccattgctaaggaccgtcttgctcgttatactgctgctgctactactgctactgctactaccaccacttctgatgccttgattaatggccatGTCTGA 411 0.3601 MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILVEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARYTAAATTATATTTTSDALINGHV 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00487 136 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Gma14g00487 136 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 1 128 - -
Gma14g00487 136 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 128 - -
Gma14g00487 136 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Gma14g00487 136 Coils Coil 90 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00487 Gma-Chr14 4607883 4610932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00487 1 131 AS2 family AT3G11090 69.466 1.64e-65 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma14g00487 LOB 2.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00487 - - gmx:100777635 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00487 14 4607883 4610932 Gma14g00487 14 4607883 4610932 ECH