Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00484 ATGGACAAGAACAGGAAACTCAGTCGGTTCAAGGATCTTTCTATAGCTTTTTGCTTTGTGGCAGTTTTTTTCTTGTTTCACCACTTGGGTTTGTGCTGTTCTTTGAATGAAGAAGGTAATGCTCTTTTGAAGTTGAGGCAGAGAATAGTGAGTGACCCTTTTGATGCTTTGTCAAATTGGGTTGATGATGAGGCTTCTGTTGACCCTTGTAACTGGTTTGGAGTTGAGTGCTCAGATGGAAGAGTTGTGGTCTTGAATTTGAAGGATCTCTGCCTTGGAGGAACTCTGGCACCTGAGCTTGTGAAACTTGTCAACATAAAGTCCATTATTTTGCGGAACAACTCTTTCTCTGGGACCATCCCTGAAGGATTTGTACAGTTAAAAGAACTGGAGGTTTTGGATTTGGGATACAACAACTTCAGTGGACATCTACCTGCTGATCTAGGGAGTAATATCTCACTAACAATCCTTTTGCTGGATAACAATGAATTTCTTGTTGGTTTATCTCCCGAAATAAATGAACTGAGGATGCTTTCCGAATGTCAAGTAGATGAAAATCAGCTGACTAATGCTGCTAAAATGCCAGCTTGTACAGAAAGAGCTACCACAAGGCATATTGGTCAAGGTAAAGGTACTCGTGGCTCACAACATTCTAATACTTCTCCTGCTGCTAATCATTACCAGTTTAATCGTGTGGCTGCTCCACCTCTTGAGAGCCCTTCTTCTCCTTCTGCTTCCCCATCAGGCTCAGCAAAACCACCAGTGCCAAAGCTAGCTCCTCATAGGAAAAATGCTTCTGATTCTTCTCCTCCCCACTCTACATCAGGTTCTGGAACACTATCTAAAACTAAAAGCACCTCATCAAAGGTTCATACAGTTCCTATTTTGGCTGGAGTTATAGGTGGTGCTGTGTTTCTTATTTTTTCAAGCATTGGCATATATCTTTGTAAAACAAAGGTAGCTAATGTCAGACCTTGGGCCATGGGACTAAGTGGACAGCTTCAGAAGGCATTTGTAACTGGTGCGCAAAAGTTAAAGAGATCAGATCTTGAAGCAGCATGTGAAGATTTTAGCAATGTAATTGGTAATTCACCCATTGGTATACTGTACAAAGGAACTTTGTCTGGTGGCGTTGAAATAGCTGTAGCTTTTGTTTCCATAACATCATCCAAGAATTGGTCAAAAACTTTAGAAGCTCAATTTAGAAGCAAGATAGATAAATTGTCGAAAGTGAACCACAAGAATTTTGTGAATCTTATTGGATACTGTGAAGAAGAGGAGCCTTTCACCAGAATGTTGGTTTTTGAATATGCCCCAAACGGAACACTATTTGAGCATCTACACATAAAAGAGGCTGAGCACTTGGATTGGGGAACAAGACTTAGAGTTGCAACGGGTGTGGCTTATTGCCTGCAACATATGCACCAATTAGATCCTCCTATGGCCCTAATCAAGCTGAATTCTTCAGCCGTTTACCTCACCGATGACTACGCTGCCAAACTCTCAGATTTAAGTTTCTCCAATGACATAGCCTCAGCTGAGACAAGAGCTATGGACAAGCCACTAGCAACTCCAGAAAGTAATGTTTATAGCTTGGGTGTTCTACTATTTGAAATGGTCACGGGTCGTCTTCCTTATTCAGTAGAACATAAGGATTCACTTGAAAACTGGGCATCACACTATTTAGAAGTTGACCAACCCCTCAAAGAAATAGTGGATCCAATTCTAGTATCTTACCAAGAAGATCAGCTGGAACAAGTTGCATCATTGATTACATCTTGTGTCCACCCTGATCCACAGAAGAGACCAACAATGAAAGATGTGAGTGAGAGACTGAGAGAGATAACAAAAATAACACCTGAATCTGCGGTTCCAAAACTTTCTCCACTTTGGTGGGCAGAGATTGAGATTGCATCTGCAGAAGCACGTTGA 1932 0.4141 MDKNRKLSRFKDLSIAFCFVAVFFLFHHLGLCCSLNEEGNALLKLRQRIVSDPFDALSNWVDDEASVDPCNWFGVECSDGRVVVLNLKDLCLGGTLAPELVKLVNIKSIILRNNSFSGTIPEGFVQLKELEVLDLGYNNFSGHLPADLGSNISLTILLLDNNEFLVGLSPEINELRMLSECQVDENQLTNAAKMPACTERATTRHIGQGKGTRGSQHSNTSPAANHYQFNRVAAPPLESPSSPSASPSGSAKPPVPKLAPHRKNASDSSPPHSTSGSGTLSKTKSTSSKVHTVPILAGVIGGAVFLIFSSIGIYLCKTKVANVRPWAMGLSGQLQKAFVTGAQKLKRSDLEAACEDFSNVIGNSPIGILYKGTLSGGVEIAVAFVSITSSKNWSKTLEAQFRSKIDKLSKVNHKNFVNLIGYCEEEEPFTRMLVFEYAPNGTLFEHLHIKEAEHLDWGTRLRVATGVAYCLQHMHQLDPPMALIKLNSSAVYLTDDYAAKLSDLSFSNDIASAETRAMDKPLATPESNVYSLGVLLFEMVTGRLPYSVEHKDSLENWASHYLEVDQPLKEIVDPILVSYQEDQLEQVASLITSCVHPDPQKRPTMKDVSERLREITKITPESAVPKLSPLWWAEIEIASAEAR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00484 643 Pfam Protein tyrosine and serine/threonine kinase 358 612 IPR001245 GO:0004672|GO:0006468
Gma14g00484 643 MobiDBLite consensus disorder prediction 194 287 - -
Gma14g00484 643 Gene3D Phosphorylase Kinase; domain 1 329 437 - -
Gma14g00484 643 Gene3D Ribonuclease Inhibitor 33 211 IPR032675 -
Gma14g00484 643 MobiDBLite consensus disorder prediction 266 287 - -
Gma14g00484 643 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Gma14g00484 643 Gene3D Transferase(Phosphotransferase) domain 1 438 624 - -
Gma14g00484 643 ProSiteProfiles Protein kinase domain profile. 355 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma14g00484 643 SUPERFAMILY L domain-like 41 191 - -
Gma14g00484 643 SUPERFAMILY Protein kinase-like (PK-like) 349 632 IPR011009 -
Gma14g00484 643 MobiDBLite consensus disorder prediction 208 227 - -
Gma14g00484 643 PANTHER PROTEIN MALE DISCOVERER 2 1 640 - -
Gma14g00484 643 Pfam Leucine rich repeat 105 163 IPR001611 GO:0005515
Gma14g00484 643 PANTHER LRR RECEPTOR-LIKE KINASE 1 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00484 Gma-Chr14 4591154 4595348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00484 13 615 Receptor kinase-like Gene Family AT1G25320 24.552 5.07e-46 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gma14g00484 PK_Tyr_Ser-Thr 1.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00484 - - gmx:100820416 1212.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00484 14 4591154 4595348 Gma14g00484 14 4591154 4595348 ECH
Gma18g00233 18 1891511 1896611 Gma14g00484 14 4591154 4595348 PCT
Gma11g02343 11 38844741 38848938 Gma14g00484 14 4591154 4595348 PCT
Gma14g00484 14 4591154 4595348 Gma18g00233 18 1891511 1896611 PCT
Gma14g00484 14 4591154 4595348 Gma11g02343 11 38844741 38848938 PCT