Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00468 ATGGCTGCCAAGAAGTACTTCGTCACAGTCTTCAAACCGGAGGAACACTCCGAAAGCATGCTTATCCCAGATGCTTTTGTGAAATCTACACGCTTACAAGGATGGAGGATCCCTGAGGATGTCATCCTCACAAATGTTGGTAGGAGAGTTTGGAATGTGAAAACACGTCTTGTTGGAAACAAAATTTACTTTGAAGAGGGTTGGAAGGTTTTTCAAGAAGAAAACTTTTTAGGAAAAGAAGATTATCTTGTTTTTAAGTATGATGGGGCCAACATTTTCAAGGTTGTAATTCTTGAACAATCATCACGGTGTGAAAGGACAGAAGCTGAAGAAGAGGATGAGGTGATAGAGATTACAGATGATGAAGAACATGAAGAAGCTGAGGATGATGAGGATGAAGGTGATGATGATGATCAGTATAGAGAAATGGAAGAAGAACATAGTGCTGAATACATGAGGAGTCAAAGTCATCCTCGTAGAGCTTCCAAAAGGTTGAGTGCAACAAGTTACAGTCCTACGGTTGAAGGTCCTCATCTTGAAGACTATGAATTTGATCCGCAAATGTATATTCAGCCTGGAAATCCAAATTTTGAAGCAAAGCTCTTCAAAAATAGACCCAACGAATTGGTTGGAATCCTTATATGGATACTCAAAGAGATGAATTACGAGACTATCATGGCTTGCCACAATGGACACCCATATATTCGGAAGTAG 714 0.3992 MAAKKYFVTVFKPEEHSESMLIPDAFVKSTRLQGWRIPEDVILTNVGRRVWNVKTRLVGNKIYFEEGWKVFQEENFLGKEDYLVFKYDGANIFKVVILEQSSRCERTEAEEEDEVIEITDDEEHEEAEDDEDEGDDDDQYREMEEEHSAEYMRSQSHPRRASKRLSATSYSPTVEGPHLEDYEFDPQMYIQPGNPNFEAKLFKNRPNELVGILIWILKEMNYETIMACHNGHPYIRK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00468 237 MobiDBLite consensus disorder prediction 104 179 - -
Gma14g00468 237 Gene3D - 1 104 IPR015300 -
Gma14g00468 237 MobiDBLite consensus disorder prediction 110 143 - -
Gma14g00468 237 Pfam B3 DNA binding domain 7 97 IPR003340 GO:0003677
Gma14g00468 237 ProSiteProfiles B3 DNA-binding domain profile. 5 101 IPR003340 GO:0003677
Gma14g00468 237 CDD B3_DNA 5 98 IPR003340 GO:0003677
Gma14g00468 237 PANTHER B3 DOMAIN-CONTAINING 5 200 - -
Gma14g00468 237 SUPERFAMILY DNA-binding pseudobarrel domain 5 100 IPR015300 -
Gma14g00468 237 SMART B3_2 7 101 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00468 Gma-Chr14 4425402 4426937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00468 7 105 B3 DNA Binding Superfamily AT4G34400 35.354 3.13e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gma14g00468 B3 3.6e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00468 - - gmx:100810634 367.081