Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00421 ATGCTTCCAAAACCCCTTTCACAAAAAACCCCATCTTCCATTTCTCTCAAAGTTCGATGCTTTCGAGCTTCTGAACCCATCCCTCTTCCCTCTTCTTCTCCTTTAAGTTCCGTTCTCTCGTCACGTTCCCCCAAACGTGTCTCTCGCCTCTTGAGGTCCGAAGCTCAACACGCTCTAATGGATTACATGCATTCCACGCGTGGCTACACTTTCTCCGACGCCGAGTACATCAGCGAGAACTCACCACGTTTTATTGAATCATTGGTCTCAATGATTGACGACAAAGATGATGTTCTTCGGTCGTTGGAAAGAttcctcagGAATCGAATGGGGAAGTTTTTTAAAGAGGCAAAAGAGATTTTTGGGTATGCTAGTGGGGTGTTGTTGTCAAAGTTAGAAGCTTATGAGAATTTGGGTTTGAGGAAATCAACTGTTGTCAAGCTTGTTGTTTGTTGCCCTTTGCTTTTGGTTGGTGATGTGAATTTTGAATTTGTTTCCGTGCTTGATTGGTTGAAGAGAATTGGGATTGAGAGTGATTGGATGGTGAATTACTTGTCTTGTTCAAGGACATATAGTTGGAAAAGAATGCTTGATGCCATGCTGTTTCTTCATAAAGTGGGTTATTCCGAGGAACAAATGCACAATTTGTTTAGGGAAAATCCTAAGTTGTTGTTGGAGGGTTTTGGGAGGAAAGTGTACTTAGTTTTTGGTAGATTGCTTAAAGTTGGTGTTGAGATGAATGTGGTTTATTCTTATTTTGTAGAGTATCCCAATATCTTGTTGAATAAGTGTGCGAACGATATGTTGAGAGTGATTGACTTTTTGGGTGCTATTGGAATGGGAAAAGATGACATTACACACATTTTGTCTAAGTACATGCATCTCCTGATTACACGTTCCTTGAAAGGTCATAAAACTGTTTGCCAGGAGTTAAAAGTTGGAAAAGCTGATTTGTACCAAATCATAAAGGATGATCCATTGAAGCTAATTAGTTTGGCATCAAAACAGGAGCAGAAGGGCAATGGAAAGGTAGATAGTCATGACCCACGTAACTATTTGGAAAAGACAACTTTCTTGCTGAAATTGGGATACATTGAGAACTCTGAAGAGATGGCCAAAGCATTAAAAATGTTTCGAGGGAGAGGTGATCAATTACAAGAGAGGTTTGATTGCCTGGTAGAAGCTGGCTTGGACTATAACAGTGTGATTGAAATGATAAAACGAGCTCCTATGATTCTAAGCCAGAACAAAGCTGTAATTCAAAAGAAGATTGATTTCTTAAAAAATGTTTTAGATTACCCTCTAGAAGGTCTCGTGGGATTCCCAACATACTTTTGCCATGATTTGGACAAAATTGTTGAAAGACTTTCAATGTATGCATGGCTGAAGGAGAGGAATGCTGTAAATCCTACATTAACCCTGAGTACCATAATTGCATCCAATGATAAACGCTTTCTCCATTTAAGCGCTACCAATGAATGA 1482 0.3934 MLPKPLSQKTPSSISLKVRCFRASEPIPLPSSSPLSSVLSSRSPKRVSRLLRSEAQHALMDYMHSTRGYTFSDAEYISENSPRFIESLVSMIDDKDDVLRSLERFLRNRMGKFFKEAKEIFGYASGVLLSKLEAYENLGLRKSTVVKLVVCCPLLLVGDVNFEFVSVLDWLKRIGIESDWMVNYLSCSRTYSWKRMLDAMLFLHKVGYSEEQMHNLFRENPKLLLEGFGRKVYLVFGRLLKVGVEMNVVYSYFVEYPNILLNKCANDMLRVIDFLGAIGMGKDDITHILSKYMHLLITRSLKGHKTVCQELKVGKADLYQIIKDDPLKLISLASKQEQKGNGKVDSHDPRNYLEKTTFLLKLGYIENSEEMAKALKMFRGRGDQLQERFDCLVEAGLDYNSVIEMIKRAPMILSQNKAVIQKKIDFLKNVLDYPLEGLVGFPTYFCHDLDKIVERLSMYAWLKERNAVNPTLTLSTIIASNDKRFLHLSATNE 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00421 493 Pfam mTERF 202 326 IPR003690 GO:0003690|GO:0006355
Gma14g00421 493 Pfam mTERF 382 486 IPR003690 GO:0003690|GO:0006355
Gma14g00421 493 Gene3D Transcription termination factor 3, mitochondrial 41 233 IPR038538 -
Gma14g00421 493 Gene3D Transcription termination factor 3, mitochondrial 234 491 IPR038538 -
Gma14g00421 493 PANTHER CGI-12 PROTEIN-RELATED 107 486 IPR003690 GO:0003690|GO:0006355
Gma14g00421 493 PANTHER CGI-12 PROTEIN-RELATED 35 107 IPR003690 GO:0003690|GO:0006355
Gma14g00421 493 SMART mt_12 403 434 IPR003690 GO:0003690|GO:0006355
Gma14g00421 493 SMART mt_12 146 177 IPR003690 GO:0003690|GO:0006355
Gma14g00421 493 SMART mt_12 111 141 IPR003690 GO:0003690|GO:0006355
Gma14g00421 493 SMART mt_12 368 398 IPR003690 GO:0003690|GO:0006355
Gma14g00421 493 SMART mt_12 251 281 IPR003690 GO:0003690|GO:0006355
Gma14g00421 493 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 107 486 - -
Gma14g00421 493 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 35 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00421 Gma-Chr14 4057251 4059648 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gma14g00421 mTERF 6.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00421 - - gmx:100803162 900.582