Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00414 ATGCCGGAAAACAGGCAGGTTCTGAGGAATGCTGATTCTAGTGACAACATTGAAGGTGGTGCAGATTTTTCTGAAGCAATTCGGCGTTTGAAAATCAATGATAATTGGGATAGAGATGCTGCAGCTCAATCTACCCAATATCCAGATCGACCCGGTGAACCTGAGTGCTTGTATTATTTGAGGACTGGAGCGTGTGGTTATGGGAGTAACTGTCGCTACCATCACCCTGCTCATATTTCAATTGGTACTCATTATGGTGAAGAACTCCCTCAGAGGGCAGGGCAACCTGATTGCGAGTATTTTCTTAAGACTGGGATGTGCAAGTATGGATCAACATGTAAATATCATCATCCAAAGGACAGGCGAGGTGCTGCTCCCGTGTCATTCAATACTTTAGGTTTTCCCATGCGTCAGGAAGAAAAATCATGTCCCTATTACATGAGAACTGGGTCTTGTAAGTTTGGTGTTGCATGCAAGTTTCATCATCCACAGTATGCTTCCCTCGGAGCATACCCATTGGCTGGTGGACCTCCTACTCCTACCTCAACAATTATTCCTACATCAGGTTTATCATATGCTGGAGGGTTTCCTGCATGGTCAGCAGTACCAAGAATGTCGTATTTATCTGGACAAGGCCTTCAATCATATGTGCCTCCTTTTCTGCCTTCTTCACAAGGTGTTATACCTGTGCAGAGCTGGAACAACTACATGGGAAATATGAACCCTGCAATGCTGAACGGTTTTCTTGGATCTAATCTTGTTTATGACTACATGAATCTGGGCGAGCCACTTTTTGGTGGGCAGGCAATCAATTCAGCTCTCCCGAATAGACCAGATCAACCAGAATGTAGATACTTTATGAGCACTGGGACCTGCAAATATGGATCTGATTGCAAGTTCCACCACCCAAAGGAAAGAATATCTCAATCATTAATAAATCCACTTGGCCTTCCTGTGAGACCTGGGCAAGCTGTATGCTCTTATTACAGAATCTATGGAATGTGCAAGTTTGGCCCAACATGCAAATTTGATCATCCAGTTTTGACTATCCCTCAGAACTATGGCTTGACCTCACCTGCTATGAATGTACTTGATACTCCTCTCACCAGGGGGTTATCAAATGTACAACCACCTGAGACATCTCCTTCTAAATTATCAAGTGACAACAAGCTTCAGCATTCTGATGCAAAAGCTGCTACAGAAGATTCATCCAAACAAGATGATACTACATCAAATTCCTTCCCGGCTTCTGCAGAGCCATTACACGACTAA 1272 0.4379 MPENRQVLRNADSSDNIEGGADFSEAIRRLKINDNWDRDAAAQSTQYPDRPGEPECLYYLRTGACGYGSNCRYHHPAHISIGTHYGEELPQRAGQPDCEYFLKTGMCKYGSTCKYHHPKDRRGAAPVSFNTLGFPMRQEEKSCPYYMRTGSCKFGVACKFHHPQYASLGAYPLAGGPPTPTSTIIPTSGLSYAGGFPAWSAVPRMSYLSGQGLQSYVPPFLPSSQGVIPVQSWNNYMGNMNPAMLNGFLGSNLVYDYMNLGEPLFGGQAINSALPNRPDQPECRYFMSTGTCKYGSDCKFHHPKERISQSLINPLGLPVRPGQAVCSYYRIYGMCKFGPTCKFDHPVLTIPQNYGLTSPAMNVLDTPLTRGLSNVQPPETSPSKLSSDNKLQHSDAKAATEDSSKQDDTTSNSFPASAEPLHD 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00414 423 ProSiteProfiles Zinc finger C3H1-type profile. 92 120 IPR000571 GO:0046872
Gma14g00414 423 SUPERFAMILY CCCH zinc finger 281 306 IPR036855 GO:0046872
Gma14g00414 423 SUPERFAMILY CCCH zinc finger 97 121 IPR036855 GO:0046872
Gma14g00414 423 MobiDBLite consensus disorder prediction 368 423 - -
Gma14g00414 423 MobiDBLite consensus disorder prediction 390 404 - -
Gma14g00414 423 SUPERFAMILY CCCH zinc finger 136 164 IPR036855 GO:0046872
Gma14g00414 423 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 141 164 IPR000571 GO:0046872
Gma14g00414 423 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 279 304 IPR000571 GO:0046872
Gma14g00414 423 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 322 346 IPR000571 GO:0046872
Gma14g00414 423 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 95 119 IPR000571 GO:0046872
Gma14g00414 423 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 52 76 IPR000571 GO:0046872
Gma14g00414 423 SUPERFAMILY CCCH zinc finger 55 77 IPR036855 GO:0046872
Gma14g00414 423 Gene3D - 87 170 - -
Gma14g00414 423 Gene3D - 275 354 - -
Gma14g00414 423 MobiDBLite consensus disorder prediction 368 389 - -
Gma14g00414 423 ProSiteProfiles Zinc finger C3H1-type profile. 277 305 IPR000571 GO:0046872
Gma14g00414 423 ProSiteProfiles Zinc finger C3H1-type profile. 320 348 IPR000571 GO:0046872
Gma14g00414 423 SUPERFAMILY CCCH zinc finger 318 346 IPR036855 GO:0046872
Gma14g00414 423 ProSiteProfiles Zinc finger C3H1-type profile. 50 78 IPR000571 GO:0046872
Gma14g00414 423 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 26 10 411 - -
Gma14g00414 423 PANTHER PROTEIN PHOSPHATASE RELATED 10 411 - -
Gma14g00414 423 Gene3D - 16 86 - -
Gma14g00414 423 SMART c3hfinal6 139 164 IPR000571 GO:0046872
Gma14g00414 423 SMART c3hfinal6 92 119 IPR000571 GO:0046872
Gma14g00414 423 SMART c3hfinal6 320 347 IPR000571 GO:0046872
Gma14g00414 423 SMART c3hfinal6 50 77 IPR000571 GO:0046872
Gma14g00414 423 SMART c3hfinal6 277 304 IPR000571 GO:0046872
Gma14g00414 423 ProSiteProfiles Zinc finger C3H1-type profile. 137 165 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00414 Gma-Chr14 4003039 4007035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00414 8 408 C3H Transcription Factor Family AT1G04990 47.255 1.87e-113 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gma14g00414 zf-CCCH 4.2e-07 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00414 - - gmx:100792928 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00414 14 4003039 4007035 Gma02g02507 02 51127120 51131805 GST