Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00410 ATGCAACTGGCGGCAGAACTCCAACGCACCCATCACCGCCACCAAAGGCAAAGGCAACAACAGGACACCACCCCCATGTGCCGCCAAATCCAGCTCACTATCTCCGATCACACCGTCGCCGGAGACGCCGTCGCTGACGACGGCGAGGATCTCTTCATTCCGCCCCTCAACTTCGCCATGGTTGATAATGGCATTTTCCGCTCCGGCTTCCCCGAACCCGCCAACTTCTCCTTCCTCCAAACCCTCGGCCTTCGTTCCATCATATATCTGTGTCCTGAGCCGTATCCGGAGGCCAACATGGAGTTCCTCAAGTCAAATGGGATCAAGCTTTTTCAGTTTGGGATTGAGGGCCATAAGGAGCCTTTTGTGAACATCCCAGAGGACACAATCCGTGAAGCACTAGAAGTTGTTCTTGATGTCAGGAACCACCCAGTTATAATTCACTGTAAGCGGGGAAAGCACCGAACAGGTTGCTTGGTAGGATGCTATAGAAAATTGCAAAAATGGTGCTTGTCATCCGTCTTTGATGAATACCAACGCTTTGCAGCCGCCAAAGCAAGAGTTTCAGATCAGAGGTTCGTAGAGTTGTTTGATATTTCCAGCATGAAACATTTGCCCATACCCTTTTCATGTTTGAAGAGGTAA 645 0.5039 MQLAAELQRTHHRHQRQRQQQDTTPMCRQIQLTISDHTVAGDAVADDGEDLFIPPLNFAMVDNGIFRSGFPEPANFSFLQTLGLRSIIYLCPEPYPEANMEFLKSNGIKLFQFGIEGHKEPFVNIPEDTIREALEVVLDVRNHPVIIHCKRGKHRTGCLVGCYRKLQKWCLSSVFDEYQRFAAAKARVSDQRFVELFDISSMKHLPIPFSCLKR 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00410 214 PRINTS Plant and fungal dual specificity phosphatase signature 52 69 IPR020428 GO:0016791
Gma14g00410 214 PRINTS Plant and fungal dual specificity phosphatase signature 89 102 IPR020428 GO:0016791
Gma14g00410 214 PRINTS Plant and fungal dual specificity phosphatase signature 108 122 IPR020428 GO:0016791
Gma14g00410 214 PRINTS Plant and fungal dual specificity phosphatase signature 125 139 IPR020428 GO:0016791
Gma14g00410 214 ProSitePatterns Tyrosine specific protein phosphatases active site. 147 157 IPR016130 GO:0016311|GO:0016791
Gma14g00410 214 MobiDBLite consensus disorder prediction 1 25 - -
Gma14g00410 214 CDD PFA-DSP_Siw14 51 198 - -
Gma14g00410 214 Gene3D Protein tyrosine phosphatase superfamily 51 201 IPR029021 -
Gma14g00410 214 PANTHER PHOSPHOTYROSINE PROTEIN PHOSPHATASES SUPERFAMILY PROTEIN ISOFORM 1 12 213 - -
Gma14g00410 214 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 53 199 IPR029021 -
Gma14g00410 214 ProSiteProfiles Dual specificity protein phosphatase domain profile. 57 208 IPR020422 GO:0006470|GO:0008138
Gma14g00410 214 Pfam Tyrosine phosphatase family 53 204 IPR004861 -
Gma14g00410 214 PANTHER TYROSINE-PROTEIN PHOSPHATASE 12 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00410 Gma-Chr14 3926783 3930968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00410 48 214 Protein tyrosine phosphatase (PTP) family AT4G03960 77.844 2.42e-100 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00410 K18045 - gmx:100799968 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00410 14 3926783 3930968 Gma02g02510 02 51194671 51201773 GST