Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00395 ATGTTATGTTTTGGTTTCCTAATTATTTTTTGTAACACATGCTTCAAAACTGCATCGACGAACGCAACCTCCTCAAGGGTCAAAAGAAACCTCCACGTACCTCTCAGGTGCGCCTGCCCCACGCAGAAACAGCGCGAAGCAGGGTTCAAGTACTTGCTCACGTACTTGGTCTCTCTGGGAGAATCCGTTTcttccattgctgatatcttcggcgtcgacgaacagagcattcttgaagccaacgagctttctgctacctccgttattttctacttcacgccgatttcggttcctttgaaaacagaGCCACCGGTTGGAATACAGAGAGCAGCGACTCCCCCGGAGGATTCCCCGTCGCCGCCGCCGCCTCCTGCTCCGGCGGAGGACGGAGATTCCGACTCTTTCAAGAAATGGGTTATTGTTGGAATCGTGGTTGTGGTTTTTGTGTTGCTTATTTTAAGTGCTGCTCTGTTTTTTCTCTGTTTCTATCAACTGCGGCGGGTGGAACACCCGCCGCCGCCGCCGCCGCCGCCAAAGGCTTTCTCGGGTTCTGCCACCACGGAGGTGACTATTCCGACGACGCATTCTTGGTCTGTTTCTTCTGAAGGGGTTCGTTACGCGATTGAGTCGTTGAGTGTGTTCAAGTTTGAGGAGTTGCAGAATGCAACGGCGTTCTTCGGTGAAGAGAACAAGATCAAGGGTTCTGTTTATAGGGCTTCTTTCAAGGGTGATTATGCTGCGGTTAAAGTTCTCAAAGGTGGCGTGTCGGGTGAGATTAACCTTCTCAAGAGGATTAACCACTTCAACAGTATAAGGTTGTCGGGTTTTTGTGTCTACAAAGGTGACACCTATCTTGTGTACGAGTTGGCGGAGAATGATTCTCTTGAAGATTGGCTTCACAGTGTTAACAAGAAGTATGAGAATTCCGTGCCTTTGAGTTGGGTGCAGAGGGTTCATATTGCTCATGATGTTGCTGACGCACTTAACTACCTTCATAACTATACTACTCCTCATGTGCACAAGAATTTGAAGAGTGGGAACGTGCATTTGGATGGGAATTTTAGGGCTAAAGTTTCGAACTTTGGGTTGGCAAGAGCTGTGGAGGATCAAGGGGTGATGGGGGGGAATGTTAGAGAGAAACTTGGAGGTTTCATGGATCCAAATTTGAGATATGAGTATCCTTTGGAACTTGCTTATTCCATGGCAGAACTTGCCAAACGCTGTGTTGCTCGCGACCTCAATGCAAGGCCATAG 1254 0.4402 MLCFGFLIIFCNTCFKTASTNATSSRVKRNLHVPLRCACPTQKQREAGFKYLLTYLVSLGESVSSIADIFGVDEQSILEANELSATSVIFYFTPISVPLKTEPPVGIQRAATPPEDSPSPPPPPAPAEDGDSDSFKKWVIVGIVVVVFVLLILSAALFFLCFYQLRRVEHPPPPPPPPKAFSGSATTEVTIPTTHSWSVSSEGVRYAIESLSVFKFEELQNATAFFGEENKIKGSVYRASFKGDYAAVKVLKGGVSGEINLLKRINHFNSIRLSGFCVYKGDTYLVYELAENDSLEDWLHSVNKKYENSVPLSWVQRVHIAHDVADALNYLHNYTTPHVHKNLKSGNVHLDGNFRAKVSNFGLARAVEDQGVMGGNVREKLGGFMDPNLRYEYPLELAYSMAELAKRCVARDLNARP 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00395 417 ProSiteProfiles Protein kinase domain profile. 148 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma14g00395 417 Gene3D LysM domain 41 104 IPR036779 -
Gma14g00395 417 PANTHER PROTEIN LYK5 373 417 - -
Gma14g00395 417 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 21 368 - -
Gma14g00395 417 Gene3D Transferase(Phosphotransferase) domain 1 207 394 - -
Gma14g00395 417 Pfam LysM domain 55 98 IPR018392 -
Gma14g00395 417 MobiDBLite consensus disorder prediction 105 130 - -
Gma14g00395 417 CDD LysM 54 90 IPR018392 -
Gma14g00395 417 MobiDBLite consensus disorder prediction 114 128 - -
Gma14g00395 417 SUPERFAMILY Protein kinase-like (PK-like) 211 417 IPR011009 -
Gma14g00395 417 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 373 417 - -
Gma14g00395 417 PANTHER PROTEIN LYK5 21 368 - -
Gma14g00395 417 Pfam Protein tyrosine and serine/threonine kinase 257 370 IPR001245 GO:0004672|GO:0006468
Gma14g00395 417 ProSiteProfiles LysM domain profile. 53 97 IPR018392 -
Gma14g00395 417 SMART LysM_2 54 98 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00395 Gma-Chr14 3681052 3682435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00395 372 417 Receptor kinase-like Gene Family AT2G33580 74.468 1.62e-14 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gma14g00395 PK_Tyr_Ser-Thr 2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00395 - - gmx:100818534 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00395 14 3681052 3682435 Gma02g02520 02 51329414 51331877 GST