Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00393 ATGGCTCAACACCGCATTGGCCACAATGGTGTTTGGGTGGTTCATGGTGGGTGGCAAGAGGTGGAGACGGGGAAGGAAGGACATATTTGTCCGTTATGTTTTCTATGGGGTGCAGGAAGGAAACAAATAGATAAATTCAGCATTGATTCTGCGCGATTCTGTGGACTTCATGGCATTGCATGGTTGGCTAAGGATAGAACAACTGATCCAAGCCAAAGAGGGTTTGGAGGGAACAGTTGCAGTGAGCTTTCTGAGATGGACATGATGAACATGGAAACTAATAATAGGAAGTTTCTTTCTCTGCCTCTCAGTAACAACAACAACAACTCTGGTAATGCCCAAATGCGCAGTAGTAGCGATAATAGAAGGGTACCTGTCACTAGCAATAGCAATATCGCTCAGGAACATCACTACAGCCACCACAACCCCACCGACACTTGCAGTGTGAGGGATAAAATCATGGCACACCCTCTTTTTCCTCGTCTCTTGTCCTCTTACCTTAATTGCCTCAAGGTTGGAGCACCTCCTGAAGTGGTGGCTAGCTTAGAGGAGTCATGTGCCAAATGTGAGTCCTTCAATGCATCATCAGGAAGGACAGGTGGTTCAATAGGTGAAGATCCAGCTCTGGACCAGTTCATGGAGGCCTACTGTGAGATGCTCATTAAGTATGAGCAAGAGCTCACTAAACCCTTCAAAGAAGCCATGCTTTTCTTCTCAAGAATTGAGTGTCAACTCAAAGCCCTAGCAGTTTCATCAGATTTTGGTCAAAGTGAAACATCTTCGCAGAATGAGGTTGATGTTCATGAAAACAACCTAGATTCTCAAGCTGAAGATCGTGAACTCAAAGTCCAGCTTTTGCGCAAGTATAGTGGATATCTAGGGAGCCTCAAGAAGGAATTTTTGAAGAAGAAAAAGAATGGAAAGTTGCCAAAGGAAGCTCGGCAACAGCTACTTGATTGGTGGAACAGGCATTATAAATGGCCATACCCTTCGGAATCTCAAAAGCAGGCACTTGCAGAATCCACAGGCCTAGATCTGAAACAAATCAACAACTGGTTCATCAATCAGAGAAAACGTCATTGGAAGCCTTCTGAGGATATGCAATTTGCCGTGATGGATGCAACTAACTACTACATGGAAAATGGGTTTCTTATTTTTTATCCCAATCACTTCCGTCAGTGGTTCCTGCCCATAACCTTTTCGGGTGATTGTTCTTCTTCGCTCACCCACGCACGCGTTACGCTGAAGGCATGA 1254 0.449 MAQHRIGHNGVWVVHGGWQEVETGKEGHICPLCFLWGAGRKQIDKFSIDSARFCGLHGIAWLAKDRTTDPSQRGFGGNSCSELSEMDMMNMETNNRKFLSLPLSNNNNNSGNAQMRSSSDNRRVPVTSNSNIAQEHHYSHHNPTDTCSVRDKIMAHPLFPRLLSSYLNCLKVGAPPEVVASLEESCAKCESFNASSGRTGGSIGEDPALDQFMEAYCEMLIKYEQELTKPFKEAMLFFSRIECQLKALAVSSDFGQSETSSQNEVDVHENNLDSQAEDRELKVQLLRKYSGYLGSLKKEFLKKKKNGKLPKEARQQLLDWWNRHYKWPYPSESQKQALAESTGLDLKQINNWFINQRKRHWKPSEDMQFAVMDATNYYMENGFLIFYPNHFRQWFLPITFSGDCSSSLTHARVTLKA 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00393 417 Pfam KNOX2 domain 202 248 IPR005541 GO:0003677|GO:0005634
Gma14g00393 417 SMART KNOX2_2 199 250 IPR005541 GO:0003677|GO:0005634
Gma14g00393 417 SUPERFAMILY Homeodomain-like 302 374 IPR009057 -
Gma14g00393 417 Pfam Homeobox KN domain 320 359 IPR008422 GO:0003677|GO:0006355
Gma14g00393 417 SMART KNOX1_2 147 191 IPR005540 GO:0003677|GO:0005634
Gma14g00393 417 ProSitePatterns 'Homeobox' domain signature. 338 361 IPR017970 GO:0000981|GO:0006355
Gma14g00393 417 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 74 387 - -
Gma14g00393 417 MobiDBLite consensus disorder prediction 102 125 - -
Gma14g00393 417 CDD homeodomain 312 364 IPR001356 GO:0003677
Gma14g00393 417 ProSiteProfiles 'Homeobox' domain profile. 300 363 IPR001356 GO:0003677
Gma14g00393 417 PANTHER HOMEOBOX KNOTTED-LIKE PROTEIN 74 387 - -
Gma14g00393 417 ProSiteProfiles ELK domain profile. 280 300 IPR005539 GO:0003677
Gma14g00393 417 SMART ELK_2 280 301 IPR005539 GO:0003677
Gma14g00393 417 Pfam ELK domain 280 301 IPR005539 GO:0003677
Gma14g00393 417 SMART HOX_1 302 367 IPR001356 GO:0003677
Gma14g00393 417 Pfam KNOX1 domain 149 190 IPR005540 GO:0003677|GO:0005634
Gma14g00393 417 Gene3D - 298 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00393 Gma-Chr14 3649433 3663894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00393 149 381 Homeobox Transcription Factor Family AT1G62360 70.040 4.98e-104 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Gma14g00393 KNOX2 6.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00393 - - gmx:100791704 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00393 14 3649433 3663894 Gma02g02523 02 51348398 51352729 GST