Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00342 ATGGGAAACTCCTGCAGAAAACCAGTGGCTCATGTATCTTCAGCAAGTTTCTTTGGAAGCACAAAGTGTCAGAGTAAGACAAAACAGAACTCAAATTCTTCTGAACGAAAAGCTCCTTTAAAAACATCAGCATCAAATGTTGGCAAACCCATTTCCAATAGCCTCAAGTCCTTCACCTTCAATGATCTAAGAGAGGCCACTAAGAACTTCAGGCAAGAAAACTTAATTGGAGAAGGAGGGTTTGGATTTGTCTACAAGGGATGGATAGATGAGAACACATGCACTCCAACAAAACCAGGGACTGGAATTGTAGTGGCCATCAAGAAACTTAAACCAGAAAGCTTTCAAGGCCACAGAGAATGGCTGGCAGAAGTCAATTATCTAGGCCAGCTTCACCACGAAAATATGGTGAAACTTATTGGTTACTGCACAGATGGTAAAAACAGGCTTCTAGTTTATGAGTTTATGCAGAAAGGAAGTTTGGAAAATCATTTATTCAGAAAAGGTGTTCAACCTATTCCATGGATTACACGGATCAACATTGCAGTTGCTGTTGCAAGAGGATTAACATTTTTACATACCCTCGATACAAATGTTATATATCGTGACTTGAAGGCTTCCAACATCCTACTTGATTCGGATTTCAATGCTAAGCTTTCGGATTTTGGCTTAGCAAGAGATGGTCCTACTGGAGATAACACTCATGTTTCAACAAGAGTTATTGGTACTCATGGTTATGCTGCACCTGAGTATGTAGCTACAGGTCATTTGACCCCAAGGAGTGATGTATACAGCTTTGGAGTTGTGTTGTTAGAATTACTAACAGGAAGGCGTGTAGTTGAAGATGATAGACCTGGATTTTCAGAAGAAACACTGGTGGATTGGGCAAGGCCATTCTTGAGTGATAGCAGAAGAATTTTGAGAATCATGGATTCAAGGTTGGGTGGTCAATACTCCAAGAAAGGAGCACGGGCTGCAGCAGCACTTGTACTACAATGTCTAAATACTGATCCCAAATATAGACCAACTATGGTAACTGTTCTAGCAGAATTGGAAGCACTACATTCCTCAAATTCATTCCCAAGGACCCCAAAATCTGGAACTGAGAATCATACAACAGAGCATTCTAGTCATTCCCACAAGTCAGCTACAAGTAGTAACAAACTATGA 1170 0.406 MGNSCRKPVAHVSSASFFGSTKCQSKTKQNSNSSERKAPLKTSASNVGKPISNSLKSFTFNDLREATKNFRQENLIGEGGFGFVYKGWIDENTCTPTKPGTGIVVAIKKLKPESFQGHREWLAEVNYLGQLHHENMVKLIGYCTDGKNRLLVYEFMQKGSLENHLFRKGVQPIPWITRINIAVAVARGLTFLHTLDTNVIYRDLKASNILLDSDFNAKLSDFGLARDGPTGDNTHVSTRVIGTHGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGRRVVEDDRPGFSEETLVDWARPFLSDSRRILRIMDSRLGGQYSKKGARAAAALVLQCLNTDPKYRPTMVTVLAELEALHSSNSFPRTPKSGTENHTTEHSSHSHKSATSSNKL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00342 389 Gene3D Phosphorylase Kinase; domain 1 45 155 - -
Gma14g00342 389 SUPERFAMILY Protein kinase-like (PK-like) 50 352 IPR011009 -
Gma14g00342 389 Gene3D Transferase(Phosphotransferase) domain 1 156 377 - -
Gma14g00342 389 SMART serkin_6 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma14g00342 389 PANTHER OS01G0588500 PROTEIN-RELATED 17 378 - -
Gma14g00342 389 ProSitePatterns Protein kinases ATP-binding region signature. 76 109 IPR017441 GO:0005524
Gma14g00342 389 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma14g00342 389 MobiDBLite consensus disorder prediction 23 48 - -
Gma14g00342 389 Pfam Protein kinase domain 71 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma14g00342 389 CDD STKc_IRAK 76 354 - -
Gma14g00342 389 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Gma14g00342 389 MobiDBLite consensus disorder prediction 357 389 - -
Gma14g00342 389 PANTHER TYROSINE KINASE FAMILY PROTEIN 17 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00342 Gma-Chr14 3065283 3069242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00342 49 351 Glycoside Hydrolase AT3G07070 51.623 6.58e-103 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma14g00342 Pkinase 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00342 - - gmx:102664409 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g00480 20 9391883 9396352 Gma14g00342 14 3065283 3069242 PCT
Gma08g02800 08 44047189 44050395 Gma14g00342 14 3065283 3069242 PCT
Gma14g00342 14 3065283 3069242 Gma20g00480 20 9391883 9396352 PCT
Gma14g00342 14 3065283 3069242 Gma08g02800 08 44047189 44050395 PCT