Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00337 ATGATTTCAGCTATGGCCGTCATGAGCATCATCTTTCTGCTGATCAAAGTAGTTGTGATATCTTGGTTACCACAAGAGGGAGATAATGGTAAGGATGATCAAGAGGACCAGTTAGTAGTAGATCATTTAGCAGAAGAAGAAGATAGTTTtctgaagaaaggaccatggacagcggaagaagatgcaatattggcagcatatgtgacaagcaatggagtgggaaactggaatatagtgcgaaagaatactggactagctcgatgtgggaaaagctgccgattaaggtggacaaatcatcttagaccagacctaaaaaaaggagcatttacccaagaagaacaactcaaagttattcaacttcatgctttaatgggaaataaatgggctagaatggcACAGGAGctgcctggtcgcacagacaacgaaataaagaacttttggaacacaagacaaaagaaaaggaaacgtgctggtttgccactctacccagaagaCATAGAAGTGTTGAATGTTGACAACCCACAAAGTATTAATCAAAATGATTCCACCCAGCATGCTAATGACTCACAACCAGGCACATCATCTCATAATGTACCAGAATTGGTATTCAACAATTACAAACTTGTCAATGGAAAGCATCCATCCTGTGTTCCACCCATTTCAGTGATGCCTGAAAACAGCACCTTTGAGCAACAAGATAATTCAGATAAGCAAGTTATGCATCCGCCACATTTGCAAATTATGCATCGTTCCCACGAGCAGCTTCAAGACTCGCTACCAAATGATTATATAAAGTTTCAGGGTGATTACATGTCTTGTGATGATAAATGTTCAAGTGGCATTTCCCTGCCATCATTTGACGATGACTTATTGAGAATGGGAGAGGATCCTCCGACTCAGACTCATGATCAATACTATGAACCACGTTCTCCACGCAGCAATGGCTATTTGGAATCCATATTTTGCCCACCACCAAAGATTGTGGAAGGATCAGATGATTGTTCCATGCAAGGAGAGTCAAGTTTAGGAAACGGAGAAAATTTAGACCCCATTATGAATCAAGATACTTTAGGTTTTGATTCTATTGACTCCATGGCCAAGGTGACACCAAACTTAACTCCAACAAGACATGAGGAGTTGAGAACCCTTCTTCAAGATGGAGGCTCTATTGGGTTTGTCCTTGTTCCTGGTTCATCTGATTATCTCCTCCTTGACCTATCATTTTAG 1227 0.2942 MISAMAVMSIIFLLIKVVVISWLPQEGDNGKDDQEDQLVVDHLAEEEDSFLKKGPWTAEEDAILAAYVTSNGVGNWNIVRKNTGLARCGKSCRLRWTNHLRPDLKKGAFTQEEQLKVIQLHALMGNKWARMAQELPGRTDNEIKNFWNTRQKKRKRAGLPLYPEDIEVLNVDNPQSINQNDSTQHANDSQPGTSSHNVPELVFNNYKLVNGKHPSCVPPISVMPENSTFEQQDNSDKQVMHPPHLQIMHRSHEQLQDSLPNDYIKFQGDYMSCDDKCSSGISLPSFDDDLLRMGEDPPTQTHDQYYEPRSPRSNGYLESIFCPPPKIVEGSDDCSMQGESSLGNGENLDPIMNQDTLGFDSIDSMAKVTPNLTPTRHEELRTLLQDGGSIGFVLVPGSSDYLLLDLSF 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00337 408 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 48 100 IPR017930 -
Gma14g00337 408 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 155 IPR017930 -
Gma14g00337 408 SUPERFAMILY Homeodomain-like 52 147 IPR009057 -
Gma14g00337 408 CDD SANT 55 100 IPR001005 -
Gma14g00337 408 Gene3D - 108 188 - -
Gma14g00337 408 SMART sant 52 102 IPR001005 -
Gma14g00337 408 SMART sant 105 153 IPR001005 -
Gma14g00337 408 CDD SANT 108 149 IPR001005 -
Gma14g00337 408 MobiDBLite consensus disorder prediction 174 197 - -
Gma14g00337 408 Pfam Myb-like DNA-binding domain 53 100 IPR001005 -
Gma14g00337 408 Pfam Myb-like DNA-binding domain 106 149 IPR001005 -
Gma14g00337 408 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 35 258 - -
Gma14g00337 408 PANTHER MYB DNA-BINDING DOMAIN PROTEIN 35 258 - -
Gma14g00337 408 ProSiteProfiles Myb-like domain profile. 48 100 IPR001005 -
Gma14g00337 408 Gene3D - 52 105 - -
Gma14g00337 408 ProSiteProfiles Myb-like domain profile. 101 151 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00337 Gma-Chr14 3024963 3030851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00337 51 166 MYB Transcription Factor Family AT5G55020 76.724 1.92e-59 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma14g00337 Myb_DNA-binding 1.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00337 K09422 - gsj:114385238 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma20g00474 20 9201024 9205351 Gma14g00337 14 3024963 3030851 PCT
Gma14g00337 14 3024963 3030851 Gma20g00474 20 9201024 9205351 PCT