Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00325 ATGGGGCTTAGCGAGTCTCTGAACCTACATGATGAAAACTCGAAGGCGGCAGCGGGTGTGAGTGCGGCGATGTCTTTGATCTTAGGTGGGATTTTTGTGTTTATAGTGTGTTATTATGTCTGCATTCGTCTTCGCTCCCAAACCCACAGAGACGTGCCTGCTGCCGCCGCCGTCGCCGCCGTCAGTGACCAAGAAACGGTCGAGAAGTGTCCCGTATTCGTTTACTCGACGGTGAAGAAGGAGAATGTGGCGGCGGAGGAGTGCGCCGTGTGCTTAGGCGAGTTTGAAGACTGTGACGTGGTAAAGATGCTACCAAAATGTGAACATATTTTCCACCAGCATTGTATTGATGCGTGGTTACCCTCACACATGAACTGTCCCATTTGTCGCCAGAAGGTTACGTTTGATAATAATGTGTCAAGGGAAGAACAAGAAGAAGAAGTACTAGGTACAGAGTCCGAGGTGGCAGGGACAACAGCGGAACCTGAAACTGTTGTGGGACCCGAGGAGGACGTTGGACAACAGCACTCTGAGTCTGAGGTTCTTGCTTGA 552 0.5072 MGLSESLNLHDENSKAAAGVSAAMSLILGGIFVFIVCYYVCIRLRSQTHRDVPAAAAVAAVSDQETVEKCPVFVYSTVKKENVAAEECAVCLGEFEDCDVVKMLPKCEHIFHQHCIDAWLPSHMNCPICRQKVTFDNNVSREEQEEEVLGTESEVAGTTAEPETVVGPEEDVGQQHSESEVLA 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00325 183 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Gma14g00325 183 PANTHER RING FINGER DOMAIN-CONTAINING 24 156 - -
Gma14g00325 183 Pfam Ring finger domain 87 130 IPR001841 -
Gma14g00325 183 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 135 IPR013083 -
Gma14g00325 183 MobiDBLite consensus disorder prediction 142 183 - -
Gma14g00325 183 SMART ring_2 88 129 IPR001841 -
Gma14g00325 183 CDD RING-H2_EL5_like 87 130 - -
Gma14g00325 183 SUPERFAMILY RING/U-box 87 136 - -
Gma14g00325 183 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL6-LIKE 24 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00325 Gma-Chr14 2854137 2854688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00325 57 133 Rapid Response to Elicitors AT3G05200 49.367 1.57e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00325 K10664 - gmx:102659826 370.933