Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00302 ATGTGGTCCACCCAAGCTAGGTCAATCAATTACCCCGAAATGGGGATGTTCGTCGTGGCGCCAGCTTCTTCCTTCCACCACCACCACCACCACCAGCCGCCGCAACACGATCCCTCTGTCATGGCGGATTCCCTTAACCCCGCCACTGCACTCGGCGTCGGCGTCGGCGTCATTCCTCTCCTCGCAGCCACGCCGTGCCTCGAATCCGACAACAACATCCTCGGAAGTAGGACACGTGGCGGCGGGGGAATTCAGCTATGGCAAGACCAACAACAACACCATCAAAGCCACTACATGAAGAAGCAGCTGCAGCAGGGTCTTCTCGACCATAATAGTAACACCAGTTCGGGGAATTTGATTCAGAACAGTGGCGAGGTAACTGCTTCTGGAACTAGTAGCGGCGGAACAACGTGCCAAGATTGTGGAAACCAGGCAAAGAAAGATTGTACCAACAGAAGGTGTAGAACCTGTTGCAAAAGCCGAGGCTTTGATTGTCCTACCCACGTTAAGAGCACTTGGGTCCCCGCCGCACGCCGGAGAGAGCGCCAGCTAATGACGTCGGCCACCGCAGCTGTCGCCGGTTCTAGTGGCTCCACTTCGGGCACTAAAAAACCTAGGCTCATTGCTTCACAAACCACAACAACTTCCCACACTTCCACTTCCAACACCACCCCTCCTAGAAGCTTTGACACTAGCTCTAGCCATCAAGATGCGGGGTTCAAAGAGTCATTACCTGGGCAAGTACGTGCACCAGCGGTTTTCAAGTGTGTAAGAGTGACGGCGGTGGAGGATGGGCAAGATGAGTATGCATATCAAGCTGTGGTGAAGATTGGTGGCCACGTGTTCAAAGGGTTTCTCTATGATCAAGGGGTGGAGAATAGGGATGTGTATCCTAACCTATCTGAGTTGCATTTGGGTGGTGGAAGTGGTGGTGCAGGAAGAAATGGGGTTTCATCTTCATCTCCAATGATGGATCCTAATGATGTTTATGCAGCTTCTGGTGGAGGGTTATTAGGGGGTTCTTCAGCATATGGTAATCCAATGAATTGA 1050 0.5238 MWSTQARSINYPEMGMFVVAPASSFHHHHHHQPPQHDPSVMADSLNPATALGVGVGVIPLLAATPCLESDNNILGSRTRGGGGIQLWQDQQQHHQSHYMKKQLQQGLLDHNSNTSSGNLIQNSGEVTASGTSSGGTTCQDCGNQAKKDCTNRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLMTSATAAVAGSSGSTSGTKKPRLIASQTTTTSHTSTSNTTPPRSFDTSSSHQDAGFKESLPGQVRAPAVFKCVRVTAVEDGQDEYAYQAVVKIGGHVFKGFLYDQGVENRDVYPNLSELHLGGGSGGAGRNGVSSSSPMMDPNDVYAASGGGLLGGSSAYGNPMN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00302 349 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 13 349 IPR007818 GO:0003700|GO:0006355
Gma14g00302 349 MobiDBLite consensus disorder prediction 108 146 - -
Gma14g00302 349 Pfam Domain of unknown function (DUF702) 135 292 - -
Gma14g00302 349 MobiDBLite consensus disorder prediction 185 244 - -
Gma14g00302 349 MobiDBLite consensus disorder prediction 108 145 - -
Gma14g00302 349 MobiDBLite consensus disorder prediction 188 240 - -
Gma14g00302 349 MobiDBLite consensus disorder prediction 307 326 - -
Gma14g00302 349 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 13 349 - -
Gma14g00302 349 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 244 291 IPR006511 -
Gma14g00302 349 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 137 179 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00302 Gma-Chr14 2633243 2636035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00302 13 329 C2H2 Transcription Factor Family AT5G12330 53.116 7.09e-90 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Gma14g00302 DUF702 8.9e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00302 - - gmx:100817745 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00302 14 2633243 2636035 Gma02g02625 02 52183202 52184834 GST