Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma14g00297 | atggaacaacctcctaacctttggacatttgaattgcaatcagaagaaaataaagtctccaatgagaaaaataagaaaagaaagctgaaaacaccagcccagcttaaggccttggagaatttttataatgagcacaaataccccacagaggaaatgaaattagtacttgctgaggagttaggattgacagaaaagcaaatatctggatggttttgccacagaaggttaaaagataaaagattgatgaaagatgaagctgttgctaatgggcgacaagatcgttcaagtggtgtcatccaagatcgtggcagtggacttgggcaagattcatgcggaagcagtaagcatgctgatcacaggtatctggatcctaaggaggttgagagccatggcctctacaatcacgaattgtcagttgcagatatgactcatggatgtaggaaccgttatcctgaaaatgttagcggggtggatgacacatcatctgagagcagctcatttttgcaagaaaggttgttttctcaaggtctggatccatatgatatggagccttctagacatcttacacctaacggagctcttccacccctaaatcccaaaggtgcagttaacatgggacacaaaccatcaggatatttgaaagtgaagggcgagatagaacatgctgctataactgctgttaagaagcaattaggaaggcattatctggaagatggtccactacttggtatagaattcgatctgcttcctccaggggcatttgaatgccaaactgcagatccagctaatgaaccatactctgctacaaatcctctgcttctgaattctccagaaatctctgctgcaaaaagacaacccagtattagctctAGATATGATTCATATTATACTAAATTTAGTTCCCAAGATCCGCATATGGAAGGAGCTGACTTTGGTTCCTTGCACGAAACTGATTTCCAGGATAAACAAGATAAGAAAGCGCGCCAGAATATAAAACAAAGGCAACCTTTATACGGTTATACCAATCATTTTCCTGGAAGGAACTCTTTCCCAGATTTGTATGAAGACTCTACTGGAGAAGCATCTGCTTATAATAGCACCAAGAGTCATAGAATGAGCACTAAACATGGTGTTGAGGGGATGCGATCTGATTCTGCTTCTAACCATAGTGATCACTATGAAGAGAAGCTTGCAGTTAAGCAGAAAGGCTTGATGCTGCATGGTTATGATAATATCAATCTAAAGAATATGCAAAGGAGTGAACATGTAAAATCTAAACCTTCTAGTTCAATCCGTAATTCCCGTGTTCCTATGGATACTGAAGAACGGGGGTTATCTGCTAGGATGGCAAAGGAAGAGATGTTTAAGGGGGACAGGAAAGCAAAAAATACATACTGCAATGTAGATGGAGCAGGAATGCTTTCAAATGAAATTATGGTTGCAAAACGAGCTAAAGTTGACATGCTTCAACAATACAATGTGAAAAAATCACCTGTTGCTGAGATGGAACAAAGGAAAATTCAGAGATCTGCTGCAGACTTGCCTTCTAGCTTTAGCGAGGATGAAACTGCTGACACCAATTCCTCACTGGATTATTAA | 1599 | 0.1782 | MEQPPNLWTFELQSEENKVSNEKNKKRKLKTPAQLKALENFYNEHKYPTEEMKLVLAEELGLTEKQISGWFCHRRLKDKRLMKDEAVANGRQDRSSGVIQDRGSGLGQDSCGSSKHADHRYLDPKEVESHGLYNHELSVADMTHGCRNRYPENVSGVDDTSSESSSFLQERLFSQGLDPYDMEPSRHLTPNGALPPLNPKGAVNMGHKPSGYLKVKGEIEHAAITAVKKQLGRHYLEDGPLLGIEFDLLPPGAFECQTADPANEPYSATNPLLLNSPEISAAKRQPSISSRYDSYYTKFSSQDPHMEGADFGSLHETDFQDKQDKKARQNIKQRQPLYGYTNHFPGRNSFPDLYEDSTGEASAYNSTKSHRMSTKHGVEGMRSDSASNHSDHYEEKLAVKQKGLMLHGYDNINLKNMQRSEHVKSKPSSSIRNSRVPMDTEERGLSARMAKEEMFKGDRKAKNTYCNVDGAGMLSNEIMVAKRAKVDMLQQYNVKKSPVAEMEQRKIQRSAADLPSSFSEDETADTNSSLDY | 532 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma14g00297 | 532 | SMART | HOX_1 | 23 | 85 | IPR001356 | GO:0003677 | |
Gma14g00297 | 532 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Gma14g00297 | 532 | PANTHER | HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN | 10 | 531 | - | - | |
Gma14g00297 | 532 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Gma14g00297 | 532 | MobiDBLite | consensus disorder prediction | 500 | 532 | - | - | |
Gma14g00297 | 532 | Gene3D | - | 14 | 97 | - | - | |
Gma14g00297 | 532 | MobiDBLite | consensus disorder prediction | 87 | 118 | - | - | |
Gma14g00297 | 532 | SUPERFAMILY | Homeodomain-like | 21 | 85 | IPR009057 | - | |
Gma14g00297 | 532 | Pfam | Homeodomain | 25 | 80 | IPR001356 | GO:0003677 | |
Gma14g00297 | 532 | MobiDBLite | consensus disorder prediction | 510 | 532 | - | - | |
Gma14g00297 | 532 | MobiDBLite | consensus disorder prediction | 419 | 444 | - | - | |
Gma14g00297 | 532 | MobiDBLite | consensus disorder prediction | 357 | 389 | - | - | |
Gma14g00297 | 532 | MobiDBLite | consensus disorder prediction | 93 | 111 | - | - | |
Gma14g00297 | 532 | PANTHER | HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN | 10 | 531 | - | - | |
Gma14g00297 | 532 | MobiDBLite | consensus disorder prediction | 319 | 345 | - | - | |
Gma14g00297 | 532 | CDD | homeodomain | 25 | 80 | IPR001356 | GO:0003677 | |
Gma14g00297 | 532 | ProSiteProfiles | 'Homeobox' domain profile. | 21 | 81 | IPR001356 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma14g00297 | Gma-Chr14 | 2578130 | 2583874 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma14g00297 | 11 | 531 | Homeobox Transcription Factor Family | AT4G03250 | 41.590 | 9.66e-89 | 280 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-other | Gma14g00297 | Homeodomain | 2.1e-16 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma14g00297 | - | - | gmx:100803515 | 1019.99 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma14g00297 | 14 | 2578130 | 2583874 | Gma02g02628 | 02 | 52224791 | 52230488 | GST |