Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00293 ATGGCTTTCTTTAGGAACTTTTCAAATGATACAGTCTCACATGGTGTCATGGAAGATAAAAGCCAAGGACAGAATGCTAATAGAGTTCATAGATCAGTAGGTAATGATTGTACTGATGCAACTTCTAGTGAGAAAGAATTTGATATGAACATGGAGGCACAGTATGAGAGTGATGGCGAACCAGATGGTTCCAGTAGACTGCAAACTGAGGCAACAGCCGATGATGGAGATGCTGTGAAAGAATCAAACTTGCAGACTACTGGTAGTAAAACAGCTATGGTCGGAAGGTGGGGTTCAACATTTTGGAAGGACTGTGGGCAAATGGACCCTCAAAATGGTTCTGAATCTGGGCAGGAATCAAAAAGTGGATCAGATTATAGAAATGCAGATGGGTCTGAAGATAATTCATTGGATGGAAGAGTGGTAAGAGTAGACTCAGATGATGATGATGGACAAAAGGAGGCAGGAAAAGGTCCAAGAGGTCACTCTGATGTTCCTGCTGAAGAGATGTTGTCTGATGAGTATTATGAGCAGGATGGGGAAGAGCAAAGTGACTCATTGCATTACGGTGGGATCAAAAAGCCCACTGAATCGAATTCATGGCCACAACGGATGTCAACCTCTGCAAATAGAACTTTGCATAGGAATTCaaggttttcagatgatgttgaagataatgatggtgaagatgatgatgatggtgataatgataatgatggtgatgatgctgattatgaagaagaggaggaagctgatgAAGATGATCCTGATGATGCAGATTTTGAGCCCGCCACAAGTGGTCATGCTGGAAACAAGGATAAAGATTGGGAAGGTGAAGGCTCGGATGATGATGATGACAGTGACGGAAATATAGTTGTCTCAGATGATGATGAATCTTTCTATGCTAAAAGACCTAAAGGAAGGCAACGAGGTAAGATTGGACAAAACATAAAATCTACCAGAGATCGCAAAGTGTATGTTGCATCAGGTCGACAAAGAAGGGTTAAATCATCTTTTGAGGGCAACGAGTCAACAACGGAGGATTCCGACAGTGATAGTGATGAGGATTTCAAAAGCACTAAAAAGCGGAGTGTTCATGTCCGCAAGAACAATGGTCGCTCATCTGCAGCCACAGGTTTTTCTTCGCGCAACAGTGAGATTCGCACTTCTAGTAGGACAGTCAGGAAGGTATCATATGTTGAAAGTGAAGAGAGTGAAGAAGCTGATGAAGGGAAAAAGAAAAAGTCCCAAAAGGAAGAAATTGAAGAGGACGATGGTGACTCCATTGAAAAGGTGCTCTGGCATCAGCCAAAAGGCATGGCTGAAGATGCTCAAAGGAATAATAGATCAACAGAGCCTGTTTTACTGAGTCACTTGTTTGATTCGGAAATTGATTGGAATGAGATTGAATTTTTGATAAAATGGAAAGGACAGTCACATTTGCACTGTCTGTGGAAATCTTTTGCTGAGCTGCAAAACCTCAGTGGTTTTAAGAAGGTTTTGAATTATACAAAGAAAATAATGGAAGACATCAGGTACAGGAGGACAATCTCAAGAGAGGAGATTGAGGTAAATGATGTTAGTAAGGAGATGGATTTAGATATTATCAAACAGAACAGTCAGGTGGAAAGAGTAATTGCAGATAGGATCAGCAAAGATAATTCTGGCAATGTTATTCCAGAATACTTGGTCAAGTGGCAAGGACTATCTTATGCTGAAGCGACTTGGGAAAAGGACATTGATATTGCTTTTGCTCAACATACTATTGATGAGTATAAGGCTCGTGAGGCTGCTATGGCAGTTCAAGGAAAGATGGTAGATTCTCAGCGTAAGAAGAGCAAAGCAAGTTTGCGGAAGCTTGAGGAACAACCTGAATGGTTGAAGGGTGGAAAGCTCCGTGATTATCAACTTGAGGGTCTGAATTTTCTTGTTAACAGCTGGAGAAATGATACAAATGTCATTTTAGCCGATGAAATGGGCCTTGGGAAAACTGTTCAGTCAGTATCAATGCTTGGTTTTCTGCAGAATGCCCAGCAAATCCATGGTCCTTTTCTTGTAGTTGTTCCATTGTCCACTTTATCAAATTGGGCCAAAGAATTCAGGAAGTGGCTTCCTGATATGAATATTATCATATATGTTGGTACTCGTGCAAGTCGAGAGGTTTGTCAACAATATGAATTTTATAATGAGAAAAAACCTGGGAAGCCAATAAAATTCAATGCACTGTTGACTACATATGAAGTAGTTTTGAAGGATAAGGCTGTTCTCTCTAAGATAAAATGGAATTATCTGATGGTGGATGAGGCTCATAGGCTAAAAAATAGTGAGGCACAGTTGTACACGACACTTTCAGAATTTAGCACCAAGAACAAGTTGCTTATCACCGGTACTCCTCTACAGAACAGTGTGGAAGAACTATGGGCTTTGCTTCATTTCCTTGATCCAGACAAGTTCAGGAGCAAGGATGAATTTGTTCAAAACTATAAAAATCTGAGCTCTTTTAATGAGAATGAGCTTGCAAATCTGCATATGGAATTGAGACCTCACATACTTCGAAGAGTTATCAAAGATGTGGAGAAATCATTACCCCCCAAAATTGAGCGTATCCTTAGGGTTGAAATGTCGCCTCTTCAGAAACAGTATTATAAGTGGATTTTGGAACGTAATTTTCACAATTTGAACAAAGGAGTTCGTGGGAATCAGGTTTCTCTTTTAAATATTGTGGTGGAATTAAAGAAGTGCTGCAACCATCCCTTCTTGTTTGAAAGTGCTGACCATGGCTATGGTGGGGACTCAGGAAGTAGTGACAACAGTAAACTAGAGAGAATTGTTTTTAGCAGTGGCAAGCTTGTCATACTTGACAAGCTCCTTGTTAAATTGCATGAAACCAAGCATCGTGTTTTGATTTTCTCTCAGATGGTTAGGATGTTAGATATACTGGGAGAGTATATGTCCCTTCGAGGGTTTCAATTTCAGAGGCTTGATGGCAGTACAAAAGCTGAGCTTCGACAACAAGCAATGGATCATTTCAATGCACCTGGTAGTGATGATTTTTGCTTCCTTCTTTCAACACGGGCAGGAGGTCTGGGTATCAACCTTGCTACAGCAGACACTGTTATAATATTTGATTCTGATTGGAATCCTCAAAATGACCTGCAGGCAATGAGTAGAGCTCATAGAATTGGACAACAAGAAGTTGTTAACATATATAGATTTGTTACAAGCAAAAGTGTTGAGGAAGATATTCTGGAACGTGCTAAGAAGAAAATGGTTCTGGACCACTTGGTGATTCAAAAACTAAATGCAGAGGGTAGACTGGAGAAGAAAGAAGCCAAAAAAGGAGGAAGTTATTTTGACAAAAATGAGCTGTCTGCAATCTTACGATTTGGAGCAGAGGAGCTCTTTAAGGAAGAAAGAAATGATGAAGAAAGCAAGAAACAACTCTTAAGTATGAATATAGATGAGATTCTTGAAAGAGCAGAAAAAGTTGAAGAGAAGGAAGCTGACGGGGAACAAGGAAATGCGTTATTGGGTGCTTTTAAGGCAAGATATGTTGCCAATTTTTGCAATGATGAAGATGATGGAAGTTTCTGGAGCCGTTGGATAAAGCCTGATGCTGTATTCCAAGCAGAGGAAGCTCTTGTTCCTCGATCTGCTAGAAATATTAAAAGTTATGCAGAAGTTGATCCATCTGAAAAAAGTAATAAAAGAAAAAAGAAGGAACCTGAACCACTTGACCGAGTTTCGAAACGTCGGAAAGCAGAGTATTCCGCTCCTGCAGTACCAATGATTGAGGGAGCATCTGTCCAAGTGAGAAATTGGTCATATGGGAATTTATCTAAAAGAGACGCACTTCGTTTTTCTCGTTCAGTTATGAAATATGGCAATGAGAGCCAAGTTGACTTAATTGTTGCCGAGGTTGGTGGTGCTGTTGGGGCTGCTCCACCTGGAGTACAGATTGAACTTTTCAATGCTCTTATTGATGGCTGTACAGAAGCAGTAGAACTTGGAAATCTTGATGCAAAGGGGCCTTTGCTGGATTTTTTTGGTGTACCAGTGAAGGCAAATGATCTACTTACCCGTGTCCAACAACTTCAACTTTTGGCAAAGCGCATTGGTCGATATGAAGATCCTATTGCACAATTTCGTGTGCTGTCATATCTCAAACCATCAAACTGGTCCAAAGGTTGTGGATGGAATCAAATTGATGATGCTAGATTGCTTCTTGGAATACATTACCATGGGTTTGGTAATTGGGAAACTATTAGATTAGATGAAAGACTTGGCCTTACGAAAAAAATTGCACCTGTAGAACTTCAACACCATGAAACTTTCTTGCCACGAGCTCCAAATTTGAAAGACCGTGCTAATGCCCTTCTGGAGCAAGAACTTGCGGTTCTTGGTGTGAAAAATGCCAACAGCAGAGTTGGACGGAAGCCTTCCAAGAAAGAGAGAGAAAATATGATTAATATCTCACTGTTACGTGGGCAGGAGAAAAAGAAAAAATCGAGTTCTGTTAATGTCCAAATGAGAAAGGATAGATTTCAGAAACCCCAGAAGGTTGAATCTATAGTAAAGGAAGAGGGTGAAATGTCTGACAATGAGGAAGTATATGAGCAGTTTAAGGAGGTAAAATGGATGGAATGGTGTCAAGATGTGATGGTTGAAGAAATGAAAACTTTGAAACGTCTTCACAGGTTGCAGCAAACTAGTGCCAATCTTCCAAAGGAAAAGGTGCTTTCAAAAATACGGAACTATTTACAACTTCTTGGGAGAAGGATAGATCAAATTGTGCTAGAACATGAACAGGAACCCTATAAGCAAGATAGAATGACTGTGCGACTGTGGAAATATGTGTCCACCTTTTCCCATCTTTCAGGGGAGAGGCTTCATCAAATATATTCCAAACTTAGACAGGAGCAAAATGAGGCAGGGGTTGGCCCCTCTCACGCCAATGGGTCAGTATCTGTTTCATTTAGCAGAAATGGAAATCCATTCCATCGCCATATGGAGAGGCAGAGAGGATTAAAAAATATGGCTCCCTATCAAATGCCAGAACCAGTTGATAATACTGGGAAATCTGAGGCATGGAAACGAAGAAGAAGAACTGAAAGTGACAATCATTTCCAGGGTCAGCCACCACCTCAAAGGACCTTAAGTAATGGAATCCGGATTACTGATCCTAACTCACTCGGGATCCTAGGTGCTGGGCCATCGGACAAACGCTTTGCTAGTGAGAAACCTTATAGGACACAACCTGGTGGGTTTCCTTCAAGACAAGGCTTCTCTTCAGCTTCAGCAATTGTACATTCTGTGGAATTTTTTTCTTCCACCCATGCGAATAAGACCTTGCGGATCCCTTTTTGGTGTGTTTTGGCGGATATGAGAAATATCCCTACACTGGGATTCACATCCTTGAAGATGGCTGAAGCCGAAAAGATCTAA 5445 0.4006 MAFFRNFSNDTVSHGVMEDKSQGQNANRVHRSVGNDCTDATSSEKEFDMNMEAQYESDGEPDGSSRLQTEATADDGDAVKESNLQTTGSKTAMVGRWGSTFWKDCGQMDPQNGSESGQESKSGSDYRNADGSEDNSLDGRVVRVDSDDDDGQKEAGKGPRGHSDVPAEEMLSDEYYEQDGEEQSDSLHYGGIKKPTESNSWPQRMSTSANRTLHRNSRFSDDVEDNDGEDDDDGDNDNDGDDADYEEEEEADEDDPDDADFEPATSGHAGNKDKDWEGEGSDDDDDSDGNIVVSDDDESFYAKRPKGRQRGKIGQNIKSTRDRKVYVASGRQRRVKSSFEGNESTTEDSDSDSDEDFKSTKKRSVHVRKNNGRSSAATGFSSRNSEIRTSSRTVRKVSYVESEESEEADEGKKKKSQKEEIEEDDGDSIEKVLWHQPKGMAEDAQRNNRSTEPVLLSHLFDSEIDWNEIEFLIKWKGQSHLHCLWKSFAELQNLSGFKKVLNYTKKIMEDIRYRRTISREEIEVNDVSKEMDLDIIKQNSQVERVIADRISKDNSGNVIPEYLVKWQGLSYAEATWEKDIDIAFAQHTIDEYKAREAAMAVQGKMVDSQRKKSKASLRKLEEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIIYVGTRASREVCQQYEFYNEKKPGKPIKFNALLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFRSKDEFVQNYKNLSSFNENELANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGSSDNSKLERIVFSSGKLVILDKLLVKLHETKHRVLIFSQMVRMLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKEAKKGGSYFDKNELSAILRFGAEELFKEERNDEESKKQLLSMNIDEILERAEKVEEKEADGEQGNALLGAFKARYVANFCNDEDDGSFWSRWIKPDAVFQAEEALVPRSARNIKSYAEVDPSEKSNKRKKKEPEPLDRVSKRRKAEYSAPAVPMIEGASVQVRNWSYGNLSKRDALRFSRSVMKYGNESQVDLIVAEVGGAVGAAPPGVQIELFNALIDGCTEAVELGNLDAKGPLLDFFGVPVKANDLLTRVQQLQLLAKRIGRYEDPIAQFRVLSYLKPSNWSKGCGWNQIDDARLLLGIHYHGFGNWETIRLDERLGLTKKIAPVELQHHETFLPRAPNLKDRANALLEQELAVLGVKNANSRVGRKPSKKERENMINISLLRGQEKKKKSSSVNVQMRKDRFQKPQKVESIVKEEGEMSDNEEVYEQFKEVKWMEWCQDVMVEEMKTLKRLHRLQQTSANLPKEKVLSKIRNYLQLLGRRIDQIVLEHEQEPYKQDRMTVRLWKYVSTFSHLSGERLHQIYSKLRQEQNEAGVGPSHANGSVSVSFSRNGNPFHRHMERQRGLKNMAPYQMPEPVDNTGKSEAWKRRRRTESDNHFQGQPPPQRTLSNGIRITDPNSLGILGAGPSDKRFASEKPYRTQPGGFPSRQGFSSASAIVHSVEFFSSTHANKTLRIPFWCVLADMRNIPTLGFTSLKMAEAEKI 1814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00293 1814 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 644 816 IPR014001 -
Gma14g00293 1814 CDD CD1_tandem 425 505 - -
Gma14g00293 1814 Pfam Domain of unknown function (DUF4208) 1544 1636 IPR025260 -
Gma14g00293 1814 SUPERFAMILY Chromo domain-like 424 507 IPR016197 -
Gma14g00293 1814 Pfam SNF2-related domain 651 920 IPR000330 GO:0005524|GO:0140658
Gma14g00293 1814 Gene3D - 623 862 IPR038718 -
Gma14g00293 1814 MobiDBLite consensus disorder prediction 1692 1707 - -
Gma14g00293 1814 MobiDBLite consensus disorder prediction 1708 1723 - -
Gma14g00293 1814 Gene3D - 542 594 - -
Gma14g00293 1814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 856 1137 IPR027417 -
Gma14g00293 1814 SMART helicmild6 978 1062 IPR001650 -
Gma14g00293 1814 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1 112 1666 - -
Gma14g00293 1814 MobiDBLite consensus disorder prediction 1681 1723 - -
Gma14g00293 1814 MobiDBLite consensus disorder prediction 1226 1253 - -
Gma14g00293 1814 MobiDBLite consensus disorder prediction 105 125 - -
Gma14g00293 1814 SMART chromo_7 538 597 IPR000953 -
Gma14g00293 1814 Gene3D - 1362 1475 - -
Gma14g00293 1814 ProSiteProfiles Chromo and chromo shadow domain profile. 427 515 IPR000953 -
Gma14g00293 1814 MobiDBLite consensus disorder prediction 79 94 - -
Gma14g00293 1814 Gene3D - 412 539 - -
Gma14g00293 1814 CDD SF2_C_SNF 938 1073 - -
Gma14g00293 1814 MobiDBLite consensus disorder prediction 1 40 - -
Gma14g00293 1814 Gene3D - 863 1093 IPR027417 -
Gma14g00293 1814 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 112 1666 - -
Gma14g00293 1814 MobiDBLite consensus disorder prediction 370 396 - -
Gma14g00293 1814 MobiDBLite consensus disorder prediction 196 214 - -
Gma14g00293 1814 MobiDBLite consensus disorder prediction 223 260 - -
Gma14g00293 1814 SUPERFAMILY Chromo domain-like 519 595 IPR016197 -
Gma14g00293 1814 MobiDBLite consensus disorder prediction 315 329 - -
Gma14g00293 1814 ProSiteProfiles Chromo and chromo shadow domain profile. 540 604 IPR000953 -
Gma14g00293 1814 Coils Coil 1146 1166 - -
Gma14g00293 1814 MobiDBLite consensus disorder prediction 1 429 - -
Gma14g00293 1814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 619 853 IPR027417 -
Gma14g00293 1814 MobiDBLite consensus disorder prediction 126 169 - -
Gma14g00293 1814 SMART ultradead3 628 828 IPR014001 -
Gma14g00293 1814 SMART DUF4208_2 1532 1637 IPR025260 -
Gma14g00293 1814 Pfam Helicase conserved C-terminal domain 949 1062 IPR001650 -
Gma14g00293 1814 MobiDBLite consensus disorder prediction 397 429 - -
Gma14g00293 1814 Pfam Chromo (CHRromatin Organisation MOdifier) domain 541 595 IPR023780 -
Gma14g00293 1814 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 952 1103 IPR001650 -
Gma14g00293 1814 MobiDBLite consensus disorder prediction 278 293 - -
Gma14g00293 1814 CDD CD2_tandem 538 594 - -
Gma14g00293 1814 Coils Coil 1092 1112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00293 Gma-Chr14 2510740 2529369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00293 654 1089 RAD5 or RAD16-like Gene Family AT1G02670 25.794 1.48e-34 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Gma14g00293 SNF2_N 1.1e-64 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00293 K11367 - gmx:100792398 3316.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00293 14 2510740 2529369 Gma02g02639 02 52284160 52299854 GST