Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00268 ATGGATGTGGCCAAGTTACATAACTCTGATGATGATGATGACAAGAAAGAAGAAGAAGTTGTGCTTCCTGGGTTTAGATTCCATCCAACAGATGAAGAACTTGTGGGGTTTTATCTGAGACGAAAGGTGGAGAAGAAGCCTCTGAGAATTGAACTCATCAAACAGATTGACATCTACAAATATGATCCATGGGATCTTCCAAAAGTGAGTTCAGTTGGGGAGAAGGAATGGTACTTCTTTTGCATAAGAGGGAGAAAATACAGGAACAGCATAAGGCCTAATAGAGTGACAGGTTCTGGATTTTGGAAAGCCACAGGGATTGACAAGCCTATATACTGTGTTAGAGAACCCCAAGAATGCATTGGTCTAAAGAAATCATTGGTCTACTATCGTGGAAGTGCTGGTAAAGGTACCAAAACTGATTGGATGATGCACGAGTTTCGCCTCCCACCCAATGGAAAAACTAGCAATAATCCACAAGCTAATGATGCCAATGATGTTCAAGAAGCTGAAGTGTGGACGCTATGCCGAATATTCAAACGAGTCCCAACTTACAAGAAGTACACACCAAATTTGAAAGACTCGGCAGCACCAATCACTGAGCCAAATCACCCCACAAACTCTTCAAGTTCCAAAACATGCAGCTTAGAATCTGACAACTGCAAGCCATACTTGACTTTCACAAACTCATCATCACCACAACTCATTCTACAAAATGAAAGGAAACCAGTTATTAATGGACATGTTGACGTTGAACGTAACCACTTATTTCTAGGTCAATTAGGCAATGTAGCTCAGGCTCCAAGTTTTTGGAATCATCATCAGAATAATAATGTGGAATTTGCTAATGAGAATTGGGATGATCTCACATCTGTGGTTCAGTTTGCCATTGATCCATCCAGGGTTTCTGATCATAGTAAAGAATTCAATAGATTTTAA 939 0.4026 MDVAKLHNSDDDDDKKEEEVVLPGFRFHPTDEELVGFYLRRKVEKKPLRIELIKQIDIYKYDPWDLPKVSSVGEKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYCVREPQECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPNGKTSNNPQANDANDVQEAEVWTLCRIFKRVPTYKKYTPNLKDSAAPITEPNHPTNSSSSKTCSLESDNCKPYLTFTNSSSPQLILQNERKPVINGHVDVERNHLFLGQLGNVAQAPSFWNHHQNNNVEFANENWDDLTSVVQFAIDPSRVSDHSKEFNRF 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00268 312 MobiDBLite consensus disorder prediction 193 214 - -
Gma14g00268 312 ProSiteProfiles NAC domain profile. 21 181 IPR003441 GO:0003677|GO:0006355
Gma14g00268 312 PANTHER - 3 311 - -
Gma14g00268 312 MobiDBLite consensus disorder prediction 200 214 - -
Gma14g00268 312 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 311 - -
Gma14g00268 312 SUPERFAMILY NAC domain 19 180 IPR036093 GO:0003677|GO:0006355
Gma14g00268 312 Pfam No apical meristem (NAM) protein 23 149 IPR003441 GO:0003677|GO:0006355
Gma14g00268 312 Gene3D NAC domain 30 184 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00268 Gma-Chr14 2283798 2287424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00268 6 219 NAC Transcription Factor Family AT1G26870 56.019 3.15e-78 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma14g00268 NAM 4.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00268 - - gsj:114384349 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00268 14 2283798 2287424 Gma02g02668 02 52545436 52548758 GST
Gma18g01065 18 14667855 14669949 Gma14g00268 14 2283798 2287424 PCT
Gma08g02828 08 44480903 44483534 Gma14g00268 14 2283798 2287424 PCT
Gma14g00268 14 2283798 2287424 Gma18g01065 18 14667855 14669949 PCT
Gma14g00268 14 2283798 2287424 Gma08g02828 08 44480903 44483534 PCT