Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00254 ATGTCATCCAACAGTTCTTTGAATATGGAATTGTCAAAGAAGACGTCATTTTTGGGTTTGAAACGATGGGTTTTGATTGGGATAGGTGTCGGTGCATTTATAGTGCTGATTTTGTGTATATTATCGATATGGGCGATGTTTCGGAGAAAGTCTAGGAGATCTCTGGACAAGTATTCTGTATCCCAAATACCAAATTTCTCAAAAGATATCGATGTTGACAAGGTTGGGGTGCAGAGTTCTCATGTTCAACCAGAAAATGTGGTTATTCCTGTTCATGACAAGGCAAGTGACAAGAATTCAGATAATGTATCAGTTCATTTGGGAAATAGCAAATCTGGTGATCCTGATAATATCAGTCAGTGCAGCTCAATTTATCATCATGAGAGAGGATTGAGTTCAATGTCCGCCGAAGAAGGAAGCTCTGGGAATGTTAAGAAGCAATCTACGTTGTCACATGGAGGGCTGGCCACTGCCTCTCCTTTAGTTGGCTTGCCAGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACACTTAGAGATCTGGAAATGGCAACCAATCATTTCTCAAGCGAGAACATCATTGGCGAGGGTGGATATGGGATTGTTTACAGGGGCAGACTGGTTAATGGAACCGAGGTGGCAGTGAAGAAGCTTCTTAACAACTTGGGCCAAGCTGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATAGGCCATGTTAGACATAAGCATCTTGTACGCCTTCTTGGATATTGTGTAGAAGGAGTTCACAGGCTGCTTGTGTATGAATATGTGAACAATGGTAACTTAGAACAATGGTTACATGGAGACATGCATCAATATGGAACACTTACCTGGGAGGCCCGCATGAAAGTTATACTTGGCACTGCCAAAGCgcttgcttatttacatgaagcaatagaaccaaaagttattcaccgggatataaagtctagcaacatattgattgatgatgaattcaatgcaaaggtttctgattttggtttggccaaacttttggattcaggcgaaagtcacataaccactagagtaatgggaACGTTTGGTTATGTGGCACCAGAATATGCTAACAGCGGTTTGTTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTCCTCTTGCTGGAAGCAGTTACTGGAAGGGACCCTGTAGACTATGCGCGTCCTGCTAATGAGGTTAATCTAGTTGAATGGCTCAAAACGATGGTGGGGACACGGAGAGCTGAAGAAGTAGTGGACTCAAGCCTTCAAGTTAAACCACCACTGCGTGCTTTGAAGCGCACTCTTTTGGTTGCACTTAGGTGCATAGATCCTGATGCTGACAAGAGGCCCAAAATGAGTCAAGTTGTGAGGATGCTTGAAGCTGACGAATATCCACTTCGAGAGGATAGAAGGAAAAGAAAGAGTGGCACTGCCAGCATGGAAATTGAAACCGTGAAGGATATTTCTGGTCCATCTGATGCTGAAAAGATGGGAATTTCTGAAAGCCACGTTGAAGAATAG 1521 0.3899 MSSNSSLNMELSKKTSFLGLKRWVLIGIGVGAFIVLILCILSIWAMFRRKSRRSLDKYSVSQIPNFSKDIDVDKVGVQSSHVQPENVVIPVHDKASDKNSDNVSVHLGNSKSGDPDNISQCSSIYHHERGLSSMSAEEGSSGNVKKQSTLSHGGLATASPLVGLPEFSHLGWGHWFTLRDLEMATNHFSSENIIGEGGYGIVYRGRLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGDMHQYGTLTWEARMKVILGTAKALAYLHEAIEPKVIHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKTMVGTRRAEEVVDSSLQVKPPLRALKRTLLVALRCIDPDADKRPKMSQVVRMLEADEYPLREDRRKRKSGTASMEIETVKDISGPSDAEKMGISESHVEE 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00254 506 Gene3D Transferase(Phosphotransferase) domain 1 264 476 - -
Gma14g00254 506 MobiDBLite consensus disorder prediction 101 119 - -
Gma14g00254 506 MobiDBLite consensus disorder prediction 466 506 - -
Gma14g00254 506 Coils Coil 208 228 - -
Gma14g00254 506 Gene3D Phosphorylase Kinase; domain 1 169 263 - -
Gma14g00254 506 ProSiteProfiles Protein kinase domain profile. 188 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma14g00254 506 SMART serkin_6 188 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma14g00254 506 MobiDBLite consensus disorder prediction 466 480 - -
Gma14g00254 506 Pfam Protein kinase domain 189 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma14g00254 506 PANTHER OS01G0323000 PROTEIN 2 506 - -
Gma14g00254 506 SUPERFAMILY Protein kinase-like (PK-like) 172 461 IPR011009 -
Gma14g00254 506 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Gma14g00254 506 PANTHER RECEPTOR-LIKE KINASE PLANT 2 506 - -
Gma14g00254 506 MobiDBLite consensus disorder prediction 92 119 - -
Gma14g00254 506 CDD STKc_IRAK 194 460 - -
Gma14g00254 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00254 Gma-Chr14 2171394 2175428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00254 19 462 Trihelix Transcription Factor Family AT1G70460 39.866 3.88e-97 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gma14g00254 Pkinase 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00254 - - gmx:100798916 1004.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma18g00965 18 12023373 12027987 Gma14g00254 14 2171394 2175428 PCT
Gma08g02904 08 45345812 45349329 Gma14g00254 14 2171394 2175428 PCT
Gma14g00254 14 2171394 2175428 Gma18g00965 18 12023373 12027987 PCT
Gma14g00254 14 2171394 2175428 Gma08g02904 08 45345812 45349329 PCT