Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00246 ATGATCCCACATCAAGAACCCGATTTCAATCTCAATCACCTCAAACTATATTACGGAAAGCTGTTTCCTTTTGTTGATTTAGTCAGATGGGTGTCTTATGGCAACGATGGGAAGCACCCTGGTTGTGATCAATCCTACATTGGGCGAAGAGAGTTTTCCTTCACTCTGGAGAATGATATATATCTGCGCTTCCAATCTTTCCACAATGCCCACGAGCTCGAAAACTCCATCAAAGAAAAGTGCCCTGTTAAGATAGATATTGGACCAGTCTACACTGTTGATCCTGCAAAAAGGAATGCCTATGCACAGAGTGGTGATAATAATGTCTTTGCCCCAGTTGAGAGGGAGTTGATTTTTGATATAGATATGTCAGATTATGATGATGTTAGATACTGCTGTTCGGCGATCAAAGTGATTGATACTGCCTTAAGAGATGACTTTGGTTTCAAACACATTCTCTGGGTATATAGTGGGCGCAGAGGTGTTCATTGTTGGGTCTGTGATGGAAAGGCAAGAAGGTTGACAAATGAACAAAGAGGTGCTATTGCTGACTATTTTCGTGTCTACAAGGGCAATGAAAATAGTCACAAGAAGGTTTCTTTGATGGGTGCTGCTCTTCATCCTTTCTTGGCGACATCATACACTAATGTTCTCAAGGACTATTTTGAGAAAAATCTGCTTACAGGTCAAAATTTACTTGCTACCGAGGAGAGATATGAGAAGATCCTTGGCATGATTCCTGATGAATCCATTGCTTCTGAACTTAGGGGAAGATGGCAAGATAGTAGGCGGTCTTCTAGTGCAAAAGAAGACATCAATGTTGTTCGATGGGAACAGTGCAAACAGTTGCTGCAATCTGGAAAACATAAGGCACAAGGGCTGCGTCGGTGCATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAGGTTTCTAAACACATGAATCATTTGCTTAAAGCACCATTCTGTGTACATCCTAAAACAGGCCGAGTTTGTGTCCCCATTGATCCAAAACGGTGTGAGGAGTTTGATCCTACTACAGTACCCACCCTTTCACAGCTGATAGAAGAGCTTAATTATGAAGGTTCAAGAGCTGATGTTGATGGTGCAGAATTCAATAGAACTACGCTTGGAAATGCAATTACGCTTTTCAGATTGTCATTCTTACAGCCTTTACTAAAAGCCTGCAAGGAGGAGATAGAAAATTCCTATTACTTAAAATTGCAGCAGTCAAAGAAtTCCCTTGCTTGGTAG 1266 0.4147 MIPHQEPDFNLNHLKLYYGKLFPFVDLVRWVSYGNDGKHPGCDQSYIGRREFSFTLENDIYLRFQSFHNAHELENSIKEKCPVKIDIGPVYTVDPAKRNAYAQSGDNNVFAPVERELIFDIDMSDYDDVRYCCSAIKVIDTALRDDFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKDYFEKNLLTGQNLLATEERYEKILGMIPDESIASELRGRWQDSRRSSSAKEDINVVRWEQCKQLLQSGKHKAQGLRRCIEEIVFCFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPKRCEEFDPTTVPTLSQLIEELNYEGSRADVDGAEFNRTTLGNAITLFRLSFLQPLLKACKEEIENSYYLKLQQSKNSLAW 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00246 421 PANTHER DNA PRIMASE 20 421 - -
Gma14g00246 421 Pfam DNA primase small subunit 119 340 IPR002755 GO:0003896|GO:0006269
Gma14g00246 421 SUPERFAMILY Prim-pol domain 11 363 - -
Gma14g00246 421 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 15 361 IPR014052 GO:0003896|GO:0006269
Gma14g00246 421 CDD AE_Prim_S 23 349 IPR014052 GO:0003896|GO:0006269
Gma14g00246 421 Gene3D DNA primase, PRIM domain 2 402 - -
Gma14g00246 421 PANTHER DNA PRIMASE SMALL SUBUNIT 20 421 IPR014052 GO:0003896|GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00246 Gma-Chr14 2098410 2102987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00246 3 421 Core DNA Replication Machinery Family AT5G41880 64.434 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00246 K02684 - gmx:100780574 829.706