LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma14g00245	ATGCAGCAAGATCAGAGAAAAAAGGGCTCAATGGAGATGGAATTTTTCTCCGATTATGGCGATGTCAGCAGGTACAAAATTCAAGAGGTCATTGGAAAAGGAAGCTATGGTGTTGTTTGTTCAGCTATTGACACTCATACTGGCGAAAAAGTAGCAATTAAAAAGATTCATGATATCTTTGAGCATGTATCTGATGCTGCGCGTATTCTGCGTGAGATAAAGTTGCTTAGACTTCTTCGACATCCTGATATTGTTGAAATTAAGCATGTTATGCTGCCTCCTTCTAGGAGGGACTTTAAAGATATTTATGTTGTTTTTGAGCTCATGGAGTCTGATCTGCATCAAGTCATTAAAGCCAATGATGACCTAACAAAAGAGCACTATCAATTTTTTCTTTACCAGTTACTTCGAGCATTGAAGTATATTCACACTGCAAATGTCTATCATCGAGACTTGAAGCCAAAGAATATACTAGCCAATGCAAACTGTAAACTTAAAATATGTGATTTTGGGTTAGCTAGAGTTGCTTTCAATGACACACCAACAACTGTGTTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCACCAGAACTCTGTGGATCATTTTACTCAAGGTATACTCCAGCAATTGACATTTGGAGTATAGGTTGCAtctttgctgaagtattaataggaaagcctcttttccctgggaaaaacgttgtccatcagttGGATCTGATGACAGATTTGCTTGGCACTCCCTCGCTGGATACTATATCCAAGGTACGCAATGATAAGGCACGGAGATACCTAACTAGTATGAGGAAAAAGCAGCCTATACCATTTGCACAAAAATTTCCTAATGCAGACCCTTTAGCACTACGACTACTGGAAAGGTTGCTCGCCTTTGATCCAAAAGATCGGCCTACTGCTGAAGAGGCATTAGCTGATCCTTACTTCAAGGGACTTTCAAAGATTGAGAGGGAACCTTCCTGCCAGCCTATTACAAAAATGGAGTTTGAATTCGAAAGGAGAAGAGTCACAAAGGAAGAAATTGGAGAGTTAATTTTCCGTGAGATTCTAGAGTACCATCCTCAATTATTGAAAGACTACATAAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCTGTTGATCAGTTCAAACAGCAGTTTTCTCATCTCGAGGAAAATGGTGGTAAAAGTTATCCAATTATGCCACTTGAAAGAAAGCATGCATCACTTCCAAGGTCAACAATGGTACATTCAAATATGGTACCCTCGAAAGAGCAATCAAACATTGCTTCCTGCATAAACCGGCAGACAACTGGGGAATTTAATAATAATTCCAGGGATACAGAAAGTCCTGCGCCAAGGTCTATTCCGGGTCTGCAAAAATTTTCACAAGCAAAACCTGGAAAAGTTGTTGGGCCAGTGATTCCATACGAATATGCAAGTGTTGTCAAGGGTACATATGATCCAAGGACATTTATGAGAGGTTCTGTTCTTCCTTCTCAACCTATCCTCCCTACGAATCATTATCAACGATCAACCTCTGGAAAACAAGAAAGGTCAGCAACAGAAGCTGACAAGGGTGTATCTTTACAATCAAAACTTGCTCAGCAATGTGGTGTGAATGCCAAAATAGCACCAGACACAGCTATCAATATTGACACCAACCCTTTTTTCATGACACGAGCAGGAGTGAACAAGATAGAGCAGGATGACCGAATAGCCATTGAGACAAAGTTGCTGCAGTCAAAGGCTCATCAATATGGTGGGATTAGTACCACTGCTCATAGAAAGGTTGGACCTGTTCAGTATGGCATGACAAGGTTGTTCTAG	1836	0.39	MQQDQRKKGSMEMEFFSDYGDVSRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHVSDAARILREIKLLRLLRHPDIVEIKHVMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFNDTPTTVFWTDYVATRWYRAPELCGSFYSRYTPAIDIWSIGCIFAEVLIGKPLFPGKNVVHQLDLMTDLLGTPSLDTISKVRNDKARRYLTSMRKKQPIPFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLSKIEREPSCQPITKMEFEFERRRVTKEEIGELIFREILEYHPQLLKDYINGTERTNFLYPSAVDQFKQQFSHLEENGGKSYPIMPLERKHASLPRSTMVHSNMVPSKEQSNIASCINRQTTGEFNNNSRDTESPAPRSIPGLQKFSQAKPGKVVGPVIPYEYASVVKGTYDPRTFMRGSVLPSQPILPTNHYQRSTSGKQERSATEADKGVSLQSKLAQQCGVNAKIAPDTAINIDTNPFFMTRAGVNKIEQDDRIAIETKLLQSKAHQYGGISTTAHRKVGPVQYGMTRLF	611

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gma14g00245	611	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	9	493	-	-
Gma14g00245	611	ProSitePatterns	MAP kinase signature.	60	163	IPR003527	GO:0004707\|GO:0005524\|GO:0006468
Gma14g00245	611	ProSiteProfiles	Protein kinase domain profile.	25	316	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Gma14g00245	611	MobiDBLite	consensus disorder prediction	505	528	-	-
Gma14g00245	611	Gene3D	Transferase(Phosphotransferase) domain 1	111	339	-	-
Gma14g00245	611	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	9	493	-	-
Gma14g00245	611	MobiDBLite	consensus disorder prediction	440	462	-	-
Gma14g00245	611	ProSitePatterns	Protein kinases ATP-binding region signature.	31	55	IPR017441	GO:0005524
Gma14g00245	611	Pfam	Protein kinase domain	25	316	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Gma14g00245	611	SUPERFAMILY	Protein kinase-like (PK-like)	21	320	IPR011009	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma14g00245	Gma-Chr14	2082830	2088692	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma14g00245	1	440	MAP Kinase Gene Family	AT2G42880	86.230	0.0	796

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_MAPK	Gma14g00245		Pkinase	8.6e-68	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma14g00245	-		-	gmx:100781115	1076.23

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Event-related genes

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Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
Gma14g00245	14	2082830	2088692	Gma02g02694	02	52706804	52713355	GST
Gma18g00956	18	11812061	11818679	Gma14g00245	14	2082830	2088692	PCT
Gma08g02910	08	45444480	45451807	Gma14g00245	14	2082830	2088692	PCT
Gma14g00245	14	2082830	2088692	Gma18g00956	18	11812061	11818679	PCT
Gma14g00245	14	2082830	2088692	Gma08g02910	08	45444480	45451807	PCT

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