Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00225 ATGTCGATGTCGAAGAGTTCCAAGATGCTTCAGTACATCAACTACCGTATGCGTGTCACCATTCAGGACGGTCGTCAACTCGTCGGAAAATTCATGGCCTTCGACCGCCACATGAACCTCGTCCTCGGCGATTGCGAGGAGTTCCGCAAACTTCCTCCGGCCAAGGGCAAGAAACCAGCCGAAGGAGGCGACCGCGAGGACCGCCGCACGCTCGGCCTCGTCCTCCTCCGCGGCGAGGAGGTCATCTCCATGACCGTCGAGGGCCCTCCTCCGCCGGAAGAGTCCCGCTCCAAGGCAGTCGGCGCCGCCGCTCTCGCCGGCCCTGGTATTGGCCGAGCCGCCGGAAGAGGTATCCCGCCCGCTCCCGTCGTCCAGGCTCAGCCAGGCCTCGCCGGCCCTGTCCGCGGTATGGGCGGCCCCGCCCCTGGCATGATGCAGCCGCAGATCTCGCGCCCGCCGCAGCTCAACGCACCGCCGGTGTCTTATCCCGGCGGTGGACCGCCTGTGATGAGGCCTCCTGGGCAGATGCCAGGGCAATTCGCTCCTCCTCCTATGGCGAGGGGTCCGCCACCGCCAATGCCGCCTGGGCAATTTGCACCGCAGAGACCTGGTGGCCCTCCGCCACAGTTCCAAGTTCCGCCGCAGTTTGGACAGAGACCCATGGGGCCTCCCCCTCCTGGACAGATGGTGAGAGGACCTCCCGCTCCCCCTCGCCCCGGAATGCCGGCTCCACCACCACCTCGCCCTGGCATGCCACCGCCACCTGGAAGCGCAACAGTAATGGCAGAATTGATTGGTTTCTTACTGTTGCCGTCACCACCGCGAACCACCGCGAACGCGACCACCGGAATAGTTGCCGCCAATTTCAGATTCGTGATGGGAAAAAATGAGTTTCTCACACCTAAAGCAATTGCCAACCGAATCAAAGCAAAAGGATTGCAGAAGCTTCGTTGGTATTGCCAGATGTGTCAGAAGCAGTGCCGAGATGAGAATGGGTTTAAATGTCATTGCATGAGTGAAGGGCACCAGCGTCAAATGCAGATTTTTGGACAAAACCCACACCGGATAGTTGAGGGCTATTCCGAAGAGTTTGAGACCACTTTTCTGGAGCACATGAAGCGCAGTCACCGATTCAGCCGTGTGGCAGCCACTGTAGTTTATAACGAATACATAAACGATAGACACCATGTTCATATGAACTCCACTCAGTGGGCTACGCTTACTGAGTTTGTTAAGTACTTGGGTCGAACTGGCAAATGTAAGGTTGAGGAAACACCCAAGGGATGGTTCATTACATATATAGATAGAGATTCAGAAACCCTTTTCAAGGAGAGGATGAAGAATAAGAGAATCAAGGCAGATATGGTAGATGAAGAAAAGCAAGAGAAGGAGATCAGGAGACAGATTGAAAAGGCTGAGCAAATGATGCAGCCCGCTACTTCTGAGGCTGATCAGCCTTCACAGGTTGAGCCTCTGAGGGAACTGAATATGGAAGATGGAATCAAGATAGGATTTTCTCTTGGGTCATCATTAGCTAAACCTGTGGTCAAGGAAAAACATGAGGCGTCAAGGGTGGTGTTTGATGAGGGTGAGGAAGAGAAATATAATGAAAGGAATCCCAGAAACAATTTGAAGAGGAAAGAAAGTGGAGGTGGAAAATCAGCTTTGGATGAAATGATGAGGGAAGAAGAGAAGAAAAAGGAAAAAATTAATCGGAAGGATTATTGGTTGCATGAGGGAATTGTTGTCAAGGTTATGAGCAAAGTCTTGGCGGAGAAGGGGTACTACAAGCAAAAGGGTGTTGTGCGGAAGGTAATTGACAAGTATGTTGGGGAAATAGAAATGCTTGAAAGCAAGCATGTGCTCAGAGTTGATCAGGCAGAGCTTGAAACTGTGATTCCACAAGTTGGGGGGCGTGTAAAAATAGTCAATGGTGCATATCGAGGATCAATTGCTAAGCTGTTGGGGGTGGATACAGATAATTTTTGTGCTAAGGTGCATATTGAGAAAGGAGTCTATGATGGCAGAGTACTTAAAGCTGTGGAATATGAGGACATTTGTAAAGTAGCATAG 2073 0.5219 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPAEGGDREDRRTLGLVLLRGEEVISMTVEGPPPPEESRSKAVGAAALAGPGIGRAAGRGIPPAPVVQAQPGLAGPVRGMGGPAPGMMQPQISRPPQLNAPPVSYPGGGPPVMRPPGQMPGQFAPPPMARGPPPPMPPGQFAPQRPGGPPPQFQVPPQFGQRPMGPPPPGQMVRGPPAPPRPGMPAPPPPRPGMPPPPGSATVMAELIGFLLLPSPPRTTANATTGIVAANFRFVMGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSEGHQRQMQIFGQNPHRIVEGYSEEFETTFLEHMKRSHRFSRVAATVVYNEYINDRHHVHMNSTQWATLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKERMKNKRIKADMVDEEKQEKEIRRQIEKAEQMMQPATSEADQPSQVEPLRELNMEDGIKIGFSLGSSLAKPVVKEKHEASRVVFDEGEEEKYNERNPRNNLKRKESGGGKSALDEMMREEEKKKEKINRKDYWLHEGIVVKVMSKVLAEKGYYKQKGVVRKVIDKYVGEIEMLESKHVLRVDQAELETVIPQVGGRVKIVNGAYRGSIAKLLGVDTDNFCAKVHIEKGVYDGRVLKAVEYEDICKVA 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00225 690 CDD KOW_KIN17 636 689 IPR041995 -
Gma14g00225 690 Gene3D - 580 633 - -
Gma14g00225 690 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 293 690 IPR037321 -
Gma14g00225 690 MobiDBLite consensus disorder prediction 530 561 - -
Gma14g00225 690 Pfam KN17 SH3-like C-terminal domain 572 625 IPR041330 -
Gma14g00225 690 Pfam Domain of Kin17 curved DNA-binding protein 344 469 IPR019447 -
Gma14g00225 690 SUPERFAMILY beta-beta-alpha zinc fingers 318 358 IPR036236 -
Gma14g00225 690 SMART Kin17_mid_2 344 470 IPR019447 -
Gma14g00225 690 Coils Coil 553 573 - -
Gma14g00225 690 SUPERFAMILY Sm-like ribonucleoproteins 7 148 IPR010920 -
Gma14g00225 690 Gene3D - 634 690 IPR014722 -
Gma14g00225 690 Coils Coil 448 475 - -
Gma14g00225 690 Pfam LSM domain 9 85 IPR001163 -
Gma14g00225 690 PANTHER BNAA05G13760D PROTEIN 293 690 - -
Gma14g00225 690 SMART Sm3 7 86 IPR001163 -
Gma14g00225 690 MobiDBLite consensus disorder prediction 135 258 - -
Gma14g00225 690 CDD Sm_B 5 87 - -
Gma14g00225 690 Gene3D - 1 95 - -
Gma14g00225 690 MobiDBLite consensus disorder prediction 152 256 - -
Gma14g00225 690 Gene3D - 352 452 IPR038254 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00225 Gma-Chr14 1914175 1922415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00225 293 690 C2H2 Transcription Factor Family AT1G55460 70.433 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00225 K13102 - gmx:100784271 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00225 14 1914175 1922415 Gma02g02713 02 52852456 52859459 GST