Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00211 ATGAGAAGGCCGAAATCGAAGGAGTTTCGCAAGCAACAACGAGTTTCAGAGGAGGAAGAGATAAACCTCTTGAATTCATGGATCCAGTTTCAGCCACCGGACTCCGGTTCGAACCCAATGTCGCTGCCGCGTCTCCCCAAAAACTCCCCCGTTGGTTGCCTCGAAGATAACACCTACTCGCGCTACGCCGGCGCGTCACGGTTTGATCAATTTCCACTCTCGAAGAAAACCAAGGACGCCCTAAGAGAGTCCAAGTTCGTGGCCATGACCGACATTCAGAGAGCGTCTCTTCCCCACGCTCTCTGTGGCCGCGACATCCTCGGCGCCGCCAAAACTGGCTCCGGTAAAACCCTCGCTTTCATTATCCCTGTCTTGGAAAAGTTGTATAGAGAGAGATGGGGACCTGAAGATGGTGTTGGCAGCATCATCATATCGCCTACAAGAGAATTGGCTGGTCAGTTATTTGATGTGTTGAAGGTTGTTGGCAAACACCATAATTTTAGTGCTGGCCTTCTCATTGGTGGTCGAAAGGACGTTGACATGGAGAAAGAACGTGTAAATGAGCTCAACATATTGATTTGCACACCCGGTAGACTGCTGCAACACATGGATGAAACTCCCAATTTTGATTGTTCACAGATGCAGGTTTTGGTACTAGATGAGGCTGATCGGATTCTAGACAGTGGGTTCAAGAAGGAACTAAATGCAATCATTTCCCAACTACCAAAGCGTAGACAAACCTTGCTTTTCTCTGCAACTCAAACAAAGTCAATTCAAGATCTTGCAAGACTAAGTTTGAAGGATCCAGAGTATCTGAGTGTGCATGAAGAATCTGTGACTTCCACTCCTACTCTGTTGAAGCAAATTGTGATGATTGTTCCCCTGGAACAAAAGTTAGATATGTTGTGGAGTTTCATAAAGACACATCTACAGTCGAAAACACTTGTCTTTCTTTCAAGCTGTAAGCAGGTAAAATTTGTCTTTGAAGCATTTAAGAAACTGCACCCTGGCATACCATTGAAGTGCCTTCATGGGAGGATGAAACAGGAAAGAAGAATGGCAATATATTCTGAGTTTTGTGAGAAGCGCTCTGTTCTCTTCTCAACTGATGTGGCCGCAAGAGGCCTTGATTTTAATAAGGCAGTTGACTGGGTTGTTCAGGTGGATTGTCCTGAAAATGTAGCTTCTTACATACATAGAGTTGGTCGTACTGCTAGATATAAATCTGATGGAAAGTCAGTTTTATTTCTGTTGCCTTCAGAAATTCAAATGCTTGAAAAGTTAAAAGCAGCAAAGGTTCCAGTGCATTTTAATAAGCCAAGGCAAGAACTACTGCAACCAGTTTCTAGTTTGTTGGCATCTTTACTGGCCAAATACCCAGACATGCAGCATCGGGCTCAGAGGGCATTCATCACATATTTGAGATCCATCCATATCCAAAAGGATAAAGACATATTTGATGTTATGAAACTACCTATTAACGAGTATTCAGCATCATTAGGTTTACCAATGACCCCCAAAATCCGTTTTCTAAACCAGAAAATTAATTCTAAAGATGTGTCAAAATCAATTTTAGTTGAACTAGAGGATTCAGACAAGGAAACTATCTTTGAGGTTTCGAGGAAGCTAGACACAGCTGCTTTCAAGGATGAGGAAACTGAAAATGATATTCTTCAGTTAGCGGATACTGCAAATGAAGGCGAAGTTAAGTCATCTGAAATTGAAGAAATAATACCAGCAACTCGTATATTGAAGAAAAAGAAACTCAAGATTAATGTACACAGGCCACTTGGGACTAGGGTCGTATTTGATGATGAGGGCCACACACTTCCTCCACTAGCCAGGATAGCGGACACACAGAGTGGCAAAGAAATGTTGCTCGATCCAGAAAAAAAAGCTGAATACTATAGAAGGATGCGAGATGATTTGAAGAAGGCTGACAACGAAGACAAGCTTATAGAGCGTCAGCGGCTTAGAGAAAAAAGAATCAAGCAGAAGATGAAATGGAAGGCTGGGAATGCGGAAGAGGACGACCAAGATGATATATCTGGGTCAGAAGTAGATGAGACTGTTGATAGACGGCATAGAAAGAGTAAAGTATACTTTGATAGTGACAGTGACGAGGGTGAAAGAAATGATGTTACAGGGAATGCAGGCATAACTACCGGTGCGGTTACGTTGGAGGAGCAAGAAGCTCTGGCTTTGAAATTGTTAAATTCCATGCACTCATAG 2232 0.4292 MRRPKSKEFRKQQRVSEEEEINLLNSWIQFQPPDSGSNPMSLPRLPKNSPVGCLEDNTYSRYAGASRFDQFPLSKKTKDALRESKFVAMTDIQRASLPHALCGRDILGAAKTGSGKTLAFIIPVLEKLYRERWGPEDGVGSIIISPTRELAGQLFDVLKVVGKHHNFSAGLLIGGRKDVDMEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTLLFSATQTKSIQDLARLSLKDPEYLSVHEESVTSTPTLLKQIVMIVPLEQKLDMLWSFIKTHLQSKTLVFLSSCKQVKFVFEAFKKLHPGIPLKCLHGRMKQERRMAIYSEFCEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYKSDGKSVLFLLPSEIQMLEKLKAAKVPVHFNKPRQELLQPVSSLLASLLAKYPDMQHRAQRAFITYLRSIHIQKDKDIFDVMKLPINEYSASLGLPMTPKIRFLNQKINSKDVSKSILVELEDSDKETIFEVSRKLDTAAFKDEETENDILQLADTANEGEVKSSEIEEIIPATRILKKKKLKINVHRPLGTRVVFDDEGHTLPPLARIADTQSGKEMLLDPEKKAEYYRRMRDDLKKADNEDKLIERQRLREKRIKQKMKWKAGNAEEDDQDDISGSEVDETVDRRHRKSKVYFDSDSDEGERNDVTGNAGITTGAVTLEEQEALALKLLNSMHS 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00211 743 Coils Coil 636 656 - -
Gma14g00211 743 SMART helicmild6 325 408 IPR001650 -
Gma14g00211 743 CDD DEADc_DDX10 77 275 - -
Gma14g00211 743 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 427 IPR027417 -
Gma14g00211 743 Pfam DEAD/DEAH box helicase 90 260 IPR011545 GO:0003676|GO:0005524
Gma14g00211 743 Pfam Helicase conserved C-terminal domain 298 407 IPR001650 -
Gma14g00211 743 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 218 226 IPR000629 -
Gma14g00211 743 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 97 272 IPR014001 -
Gma14g00211 743 SMART ultradead3 85 289 IPR014001 -
Gma14g00211 743 Gene3D - 53 278 IPR027417 -
Gma14g00211 743 SMART DUF4217_3 447 510 IPR025313 -
Gma14g00211 743 CDD SF2_C_DEAD 286 417 - -
Gma14g00211 743 Pfam Domain of unknown function (DUF4217) 451 508 IPR025313 -
Gma14g00211 743 PANTHER RNA HELICASE 58 525 - -
Gma14g00211 743 MobiDBLite consensus disorder prediction 699 718 - -
Gma14g00211 743 MobiDBLite consensus disorder prediction 665 690 - -
Gma14g00211 743 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 66 94 IPR014014 GO:0003724
Gma14g00211 743 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 294 452 IPR001650 -
Gma14g00211 743 Gene3D - 284 527 IPR027417 -
Gma14g00211 743 PANTHER ATP-DEPENDENT RNA HELICASE DDX10-RELATED 58 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00211 Gma-Chr14 1783466 1787886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00211 93 429 Eukaryotic Initiation Factors Gene Family AT3G19760 30.409 1.44e-37 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00211 K14776 - gmx:100820055 1442.56