Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00165 atggaggagGCCGTCTCCGATCCCCATCCGGAGATGGAGCAGCAGCAGCAGCCTCCGCCGCTTCAGAACGGGGACTCCGACGAGCGCTGCGCCAAGAAACCTAAATTCGACCAAGGCGCTGAATTCAAGAGAGTGGCGGAGATTGTGCTGGTTCTCTCCACCATGGCCACGGTGCGCGCGGGGAGAAAGCCCTCCGACGCCGAGGTCGAGCTCATGAGGGAGGCTCGCGCCAAGCTCGCCAGCCTCTGCGAGGGTTTGGCTCCGAAGGATATTGTCACCAGGGAAGCTATTGGCACCGTCATTGAGGATCTCGGATTGAACTTCAAGCTCAAGGACCAGAGATTAGGGTTTCGAACTCCCAAGATGTCCATTGCCGAGAGGTATTCCCATGCTAAGTGGAAGATGGAAGAAGCAAAGAAAATTTCTGCACCTTCTACACCTTCTACAACTCACACCTCTCAGCCCTTGCAAACAAACATTGTTGGACCAGTTGACAATCGTGTGCCATCACATGTTCGAATTTTTCCTTCTGATAAATCAAGCCACCCATCAATCCCTTCTATGGGTGCCATAGTGTCTATTCCTGCCCATGTTTCTGTGGGATCTTCTGCAGCATTGCAGTATCAAGTGATCAGCAATGAAGTAAGACCACCAGTGGTTTCTGGTGTGATGCCTGGCAGTCACTTGGGGAGAAATGCATCTTCTTTAGCATTGCCTAAAGTTGAACACCCACAGTTCAAAGTTGATGGAGGATCAAATGGGTCTCCTTACATGCTGCAAGTCCAAGCAAATTCATCAGCAAACCAACCTTTGGTGAATGCTCCAACATGGTCTATACAGAGTCAAGCTGCTTCATTAGCTAGAAGTGCATCAGAAAACAAGGTGCCTGTTCAGAACTCTGTCAAGGTTGAAGGAACACCTGACATAACTGTATCAAGGGCAGGACCACAAATAACAACAGACCCGAGCTTTAAACCATTTATCACTCAAACAGCCCCTGGAACTTTACCTAGTGTGCACCAGCCATTGCAGGCCACAAACATTGTTCAGCCTCCTTTGATTCCTAGTCACACTGACATTGCTAAGATTGTCCAGAAAGTGTTACAACCAAAGCTTCCTGTCCATCCCACGTGGACTCCTCCATCAAGGGACTATATGAATAAGGCTTTCACTTGTCAGATGTGTGAGCTCAGTGTCAATGAGGTTGATACTGTACTTCTCTGTGATGCTTGTGAAAAGGGATTTCACTTGAAGTGCCTGCAGCCATCAGTCTTGAGAGGAATTCATAATAGAGTTGATTGGCACTGTATGAGGTGCTTGAGTTTAAGTGGTGGAAAGCCTTTGCCTCCAAAATATGGTCGTGTGATGAGATCCTCGAACACACCACCAAAATTGCCTTCTAATACAGGTGGCATTCTACCTTGTTCTGAGAAGAAAGTAGAGAACATAGATCCAAAGGTCATCCCACAAACGTTAGCAACAAATGGGAGCTCTGTTCAAACTGTTTGCGGTGGCAATCACAATGTTGAGCTGTCATCTGAATCAAGGATACCAGATACCAAAGATATGCAAGGGACTAACATTTCATCCACCATTGAAGCTATTGATAAGAAGCCTGATCCAAACAACTCTATGAAATCTCTTAGTGCAGCTTCTAGTCCTTCCCCTTGCTTGCTAGGTAAAAATTCTGTTCAACAAATAAATTCTAAGGTTTTGACTGGTAAAGAGACTTTGGAATCTGAGTCTCTTCCTAAATTATCTGAGCCAGCTAAGTGTGAAGATTTGCAATCATCACAAGATTTTCAAGTTGAACATACAATGTCACAAGACAATCCTGAAGTATCATCAGATAAACATGTCGACCATAATATTATGAATAATAAACAGAAGGAATTTCATGGAGGAAAAAGTTTAACTTATGATATTAAGCTTGATGACCAAGATGCTGCACTTGCAAATTTTGTTGGAACTTCTGGAACTAATACTGACGGTACACAGCACTCTGCATTATCTTCAGATAGTTCACATGCAGTAGAATGGATTGGTGATGTAGTACAACTAGTAGATGAGAAAAAGTATTACCAATCTTGTTGTATTGATGGAGTAACATATAGGCTGCAGGGTCATGCTCTTTTCCCCACCAGCCATGGGAAACTAACTCCTTCTAAACTCCAGTCTATGTGGGAAGATTGCAAAACTGGGTTAAAGTGGGTTAAGGTGACAAACTGCTACTTTCCTGATGATTTGCCAGGGAATATTGGTCATCCGTGTATATCTGAAGTCAACGAGGTTTATGAATCTAATGGTGATAGAACTGAAATGGCTAACTCTATTCGAGGGCCATGTGAAGTCCTCCCATCTGATAAATTTAAACAAGAAAATGACATGCGATGTCAGTTAGGAATTGAGGAAACTTCTAAAGTGCAGCCCATTTTCCTTTGCAGGTGGTTTTATGACGAATTCAAGAAGTTATTTCAACCTGTAATCAGTTGA 2493 0.4388 MEEAVSDPHPEMEQQQQPPPLQNGDSDERCAKKPKFDQGAEFKRVAEIVLVLSTMATVRAGRKPSDAEVELMREARAKLASLCEGLAPKDIVTREAIGTVIEDLGLNFKLKDQRLGFRTPKMSIAERYSHAKWKMEEAKKISAPSTPSTTHTSQPLQTNIVGPVDNRVPSHVRIFPSDKSSHPSIPSMGAIVSIPAHVSVGSSAALQYQVISNEVRPPVVSGVMPGSHLGRNASSLALPKVEHPQFKVDGGSNGSPYMLQVQANSSANQPLVNAPTWSIQSQAASLARSASENKVPVQNSVKVEGTPDITVSRAGPQITTDPSFKPFITQTAPGTLPSVHQPLQATNIVQPPLIPSHTDIAKIVQKVLQPKLPVHPTWTPPSRDYMNKAFTCQMCELSVNEVDTVLLCDACEKGFHLKCLQPSVLRGIHNRVDWHCMRCLSLSGGKPLPPKYGRVMRSSNTPPKLPSNTGGILPCSEKKVENIDPKVIPQTLATNGSSVQTVCGGNHNVELSSESRIPDTKDMQGTNISSTIEAIDKKPDPNNSMKSLSAASSPSPCLLGKNSVQQINSKVLTGKETLESESLPKLSEPAKCEDLQSSQDFQVEHTMSQDNPEVSSDKHVDHNIMNNKQKEFHGGKSLTYDIKLDDQDAALANFVGTSGTNTDGTQHSALSSDSSHAVEWIGDVVQLVDEKKYYQSCCIDGVTYRLQGHALFPTSHGKLTPSKLQSMWEDCKTGLKWVKVTNCYFPDDLPGNIGHPCISEVNEVYESNGDRTEMANSIRGPCEVLPSDKFKQENDMRCQLGIEETSKVQPIFLCRWFYDEFKKLFQPVIS 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00165 830 SMART PHD_3 391 440 IPR001965 -
Gma14g00165 830 ProSiteProfiles BAH domain profile. 702 829 IPR001025 GO:0003682
Gma14g00165 830 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 381 453 IPR013083 -
Gma14g00165 830 Pfam PHD-finger 392 440 IPR019787 -
Gma14g00165 830 SUPERFAMILY FYVE/PHD zinc finger 382 447 IPR011011 -
Gma14g00165 830 Gene3D - 681 829 IPR043151 -
Gma14g00165 830 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 16 829 - -
Gma14g00165 830 CDD BAH 701 824 - -
Gma14g00165 830 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 16 829 - -
Gma14g00165 830 MobiDBLite consensus disorder prediction 532 560 - -
Gma14g00165 830 ProSiteProfiles Zinc finger PHD-type profile. 389 442 IPR019787 -
Gma14g00165 830 MobiDBLite consensus disorder prediction 142 163 - -
Gma14g00165 830 MobiDBLite consensus disorder prediction 1 36 - -
Gma14g00165 830 ProSitePatterns Zinc finger PHD-type signature. 392 439 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00165 Gma-Chr14 1319835 1328610 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Gma14g00165 PHD 1.9e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00165 - - gmx:100783208 1637.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00165 14 1319835 1328610 Gma14g00165 14 1319835 1328610 ECH
Gma14g00165 14 1319835 1328610 Gma02g02774 02 53340935 53348627 GST