Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00162 ATGGCATCTTCTTCAGACTCATGGGTGAAGGAATATAATGAAGCACTGAAACTTGCTGATGATATCAGTGGCATGATTTCTGAGCAGAGTTCATTTCCTGCATCTGGACCAGAAACCCAGCATCATTCATCTGCTATAAGGAGAAAGATTACAATATTGGGGACCAGGCTTGATAGCTTGCAGTCCCTTTTGTCAAAGCTTCCCGGCAAGCAGCCCATATCTGAGAAGGAGATGAATCGGCGCAAGGACATGCTTTCAAATTTGAGATCAAAAGTTAATCAGATGGCTTCCACGTTGAACATGTCAAACTTTGCAAATAGGGATAGTTTGCTTGGGCCAGAAAGAAAACCAGATGCAATGACCAGAATGGTTGGCCTGGACAACAATGGACTTGTTGGACTTCAGCGGCAAATTATGAAAGAACAAGACGATGGCCTTGAGCAATTGGAAGAGACCGTGGCAAGCACCAAACATATTGCATTGGCAGTTAATGAAGAGCTGGATCTACACACTAGACTAATTGATGACTTAGACCAACATGTAGATGTCACAGATTCTCGGCTTAGGCGGGTGCAGAAGAACTTAGCGGTTTTAAATAAGCGAACCAAGGGTGGTTGCTCCTGCATGTGCATGCTATTATCAGTGGTTGGTATAGTGGCTTTGATTGTTGTTATTTGGCTATTGGTCAAATATTTGTAA 699 0.4306 MASSSDSWVKEYNEALKLADDISGMISEQSSFPASGPETQHHSSAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLSNLRSKVNQMASTLNMSNFANRDSLLGPERKPDAMTRMVGLDNNGLVGLQRQIMKEQDDGLEQLEETVASTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAVLNKRTKGGCSCMCMLLSVVGIVALIVVIWLLVKYL 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00162 232 Gene3D - 138 200 - -
Gma14g00162 232 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 136 198 IPR000727 -
Gma14g00162 232 SUPERFAMILY SNARE fusion complex 127 197 - -
Gma14g00162 232 SMART tSNARE_6 131 198 IPR000727 -
Gma14g00162 232 Pfam SNARE domain 173 224 IPR000727 -
Gma14g00162 232 PANTHER SYNTAXIN 1 227 IPR045242 -
Gma14g00162 232 SUPERFAMILY t-snare proteins 21 100 IPR010989 GO:0016020|GO:0016192
Gma14g00162 232 CDD SNARE_Qc 139 196 - -
Gma14g00162 232 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00162 Gma-Chr14 1299722 1302149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00162 1 232 SNARE and Associated Proteins AT1G16240 73.820 7.68e-126 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00162 K08503 - gmx:100782666 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00162 14 1299722 1302149 Gma14g00162 14 1299722 1302149 ECH
Gma18g00773 18 8586679 8591412 Gma14g00162 14 1299722 1302149 PCT
Gma08g03012 08 46695856 46700504 Gma14g00162 14 1299722 1302149 PCT
Gma14g00162 14 1299722 1302149 Gma18g00773 18 8586679 8591412 PCT
Gma14g00162 14 1299722 1302149 Gma08g03012 08 46695856 46700504 PCT