Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00156 ATGCCGGACCAAGATATTTTCAGTTGCATTAGTGAACCTCGTCTTGTAGCCAGAAAGTTCTTGGCCAGACCTCAGCATGAGGGTGTTGGAGCCGTTGTTAGAAGAAGCATAGGGAGATTTGAACTCAAGTACTTTGATCCTTTCCTTGTCTTGGATGAATTCTCAGTGACTGCTCCTGCTGGGTTTCCTGATCATCCACATAGAGGATTTGAGACGGTCACATACATGTTGCAGGGAGCTGTAACGCACGAAGATTTTGAAGGACATAAGGGAACAATTGAAGCTGGTGACTTGCAATGGATGACTGCAGGGAGAGGGTTAGTTCACTCAGAAATGCCTGCAGCTCAAGGAACCCAAAAGGGTCTTCAGCTGTGGATCAATCTTGCTTCAAAACATAAAATGATTGAGCCAAGGTACCAAGAAATGTTGAGCAAGGACATAGCTGAAACTATGATAGATGGTATCAAAGTTAGAGTTATAGCAGGGGAAGCTCTTGGAATAAAGTCTCCAATCTACACAAGGACACCAACCATGTACTTGGATTTTACTCTTAAACCTGGTGCTCACTTGCAACAACTTATACCAAAGTCTTGGAATGCCTTCGTCTACATATTGGAAGGAGAGGGTGTATTTGGAAACCAAAAGTCTCAACCTGTAACCTCTCACCATATACTTCTTCTTGGTCCTGGGGATGGCCTAGAGGCATGGAACAAATCTTCTAAGGTCCTTAGGTTCATTTTGGTTGGAGGTGAACCATTGGGTGAACCTGTGGTGCAATTTGGACCTTTTGTGATGAATACTCAGGAAGAGATTGACCAAACAATTGATGATTTTGAGAACTATACCAACGGATTTGAGAAAGCTAGACATTGGAGGTCTGAAAGTGCAATTAGCCTTGATTATTGA 906 0.4305 MPDQDIFSCISEPRLVARKFLARPQHEGVGAVVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAVTHEDFEGHKGTIEAGDLQWMTAGRGLVHSEMPAAQGTQKGLQLWINLASKHKMIEPRYQEMLSKDIAETMIDGIKVRVIAGEALGIKSPIYTRTPTMYLDFTLKPGAHLQQLIPKSWNAFVYILEGEGVFGNQKSQPVTSHHILLLGPGDGLEAWNKSSKVLRFILVGGEPLGEPVVQFGPFVMNTQEEIDQTIDDFENYTNGFEKARHWRSESAISLDY 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00156 301 PIRSF Pirin 12 292 IPR012093 -
Gma14g00156 301 PANTHER PIRIN-RELATED 8 298 IPR012093 -
Gma14g00156 301 CDD cupin_pirin_N 31 128 - -
Gma14g00156 301 CDD cupin_pirin_C 176 252 - -
Gma14g00156 301 Gene3D Jelly Rolls 148 253 IPR014710 -
Gma14g00156 301 PANTHER OS09G0484800 PROTEIN 8 298 - -
Gma14g00156 301 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Gma14g00156 301 Pfam Pirin 33 126 IPR003829 -
Gma14g00156 301 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
Gma14g00156 301 Gene3D Jelly Rolls 27 279 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00156 Gma-Chr14 1255156 1258263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00156 11 289 Calmodulin-binding Proteins AT3G59220 59.431 1.01e-126 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00156 K06911 - gmx:100790637 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00156 14 1255156 1258263 Gma14g00156 14 1255156 1258263 ECH
Gma14g00156 14 1255156 1258263 Gma02g02781 02 53423139 53434635 GST
Gma18g00757 18 8128859 8138237 Gma14g00156 14 1255156 1258263 PCT
Gma08g03026 08 46850059 46853561 Gma14g00156 14 1255156 1258263 PCT
Gma14g00156 14 1255156 1258263 Gma18g00757 18 8128859 8138237 PCT
Gma14g00156 14 1255156 1258263 Gma08g03026 08 46850059 46853561 PCT