Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00149 ATGCTTAAAGCTAGTCGTCCAGGGGCCACCCCTTTCTCCCTCATCTTCATTCTTCGCTCAATCGAGGTCTTCTCGATTTCCTTCTCTATAACACAACGCTCTCTTCTCTTGCAACCAAAGTACTTGTTCCAGTGTCTACTCTACTCAAAAAGGATTTGGGACATCATGTGCAGTGATTCGAAAAGTAAACTTTCTTCCCCAACCCTCGTCGTCATGGAGAATAGTAACATTCAGAAGCAGAATCTGGATGGTCTCTACAACTCGGTTTTGCTTGAATTGTCTGCATCTGATGATTATGAAGCTTTCAAAAGAGAGGTGGAGGAAAAAGGCTTAGATGTGAACGAGGCAGGCTTTTGGTACGGTAGAAGAATTGGGTCAAAGAAGATGGGATCTGAAACGAGGACCCCTCTGATGATTGCTTCTTTGTTTGGAAGCGCCAAGGTGCTCAATTATATTCTTCTTCAGAAAGGAGGAGGTGTTGATGTGAACAGGGTCTGTGGTTCTGATAGGGCCACTGCTCTCCATTGTGCTGTTGCTGGTGGCTCCGAATCCTCACTTGAGATTGTCAAGCTCTTGCTTGATGCTGGGGCTGATGCTGAGTGCCTTGATGCGAGTGGCAACAAGCCGGTTAATCTGATTGCTCCTGCCTTTGATTCTTTGTCCAAATCGCGAAGGAAGGCTTTGGAGATGTTCCTCAGGGGTGGTGGGGAAAGAGATGAACTCATGAGCCAGGAGATGGAGCTACAGATGTTTTCTGTTCCAGAGAAAAAAGAAGGAAGTGATAATAAGAAAGAATACCCTGTTGATATATCGCTGCCTGACATCAACAACGGTGTATATGGAACAGATGAGTTTAGGATGTACAACTTCAAGGTGAAGCCTTGCTCAAGGGCTTACTCCCATGACTGGACTGAGTGTCCATTCGTTCATCCAGGGGAGAATGCGAGGAGGAGAGACCCACGGAAATACCCTTACAGCTGTGTTCCTTGCCCTGAGTTCCGCAAAGGGACCTGCCAGAAGGGTGATTCCTGCGAGTATGCTCATGGTGTTTTTGAGTCCTGGCTACATCCCGCCCAATACCGGACAAGGCTTTGCAAGGATGAGACGGGCTGTGCTAGAAAAGTATGCTTCTTTGCTCACAAACCTGAAGAGCTACGCCCTGTGTATGCTTCCACTGGGTCGGCTATGCCATCACCAAAATCCTATTCAGCTAGTGGACTTGACATGACAGCGATGAGTCCATTGGCTCTTAGTTCCACATCTTTGCCGATGCCAACTGTTTCAACCCCACCCATGTCTCCCTTGGCAGCAGCTTCATCTCCCAAGAGTGGAAGCATGTGGCAGAACAAAATAAACCTTACTCCACCATCGTTGCAGCTCCCTGGTAGCCGACTGAAGGCTGCTTTGAGTGCCAGGGATCTGGAGATGGAGATGGAACTGCTCGGTCTAGAAAGCCCTGCTCGCCAACAACAGCAGCAGCAGCAACAATTGATCGAAGAGATTGCCAGGATCTCTTCCCCATCTTTCCGGAGCAAGGAATTCAATAGGATTGTTGATTTGAATCCTACTAACCTTGATGACCTGTTAGCATCTGCTGACCCTTCTGTATTTTCTCAACTACATGGACTTTCTGTGCAACCTTCAACACCCACACAAAGTGGGCTTCAGATGCGCCAAAACATGAACCACCTCCGTGCGAGTTATCCATCCAACATCCCTTCCTCTCCTGTGAGGAAGCCCTCAGCTTTTGGGTTTGACTCATCAGCTGCTGTGGCAACTGCAGTGATGAATTCTAGGTCTGCTGCCTTCGCAAAGCGAAGCCAAAGTTTCATTGATCGTGGAGCTGCAACCCACCATCTTGGGCTGTCTTCAGCTTCCAACTCTTCTTGCAGGGTATCCTCTACCCTTTCAGATTGGAGTTCCCCTACCGGGAAACTGGATTGGGGTGTAAACGGAGACAAGCTGAACAAGCTGAGGAAATCTACTTCCTTTGGATTCAGAAACAGTGGGGTAACTGCATCCCCCATAGCACAGCCTGAATTTGGTGCTGAGCCGGATGTCTCATGGGTTCATTCATTGGTTAAAGATGTTCCCTCCGAGAGGTCTGAGATATTTGGTGCTGAGAAGCAACAATATGATCTCAGTAAAGAGATGCTTCCACCATGGATGGAGCAGCTGTATATAGAGCAGGAGCAGATGGTAGCATGA 2208 0.4814 MLKASRPGATPFSLIFILRSIEVFSISFSITQRSLLLQPKYLFQCLLYSKRIWDIMCSDSKSKLSSPTLVVMENSNIQKQNLDGLYNSVLLELSASDDYEAFKREVEEKGLDVNEAGFWYGRRIGSKKMGSETRTPLMIASLFGSAKVLNYILLQKGGGVDVNRVCGSDRATALHCAVAGGSESSLEIVKLLLDAGADAECLDASGNKPVNLIAPAFDSLSKSRRKALEMFLRGGGERDELMSQEMELQMFSVPEKKEGSDNKKEYPVDISLPDINNGVYGTDEFRMYNFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPEFRKGTCQKGDSCEYAHGVFESWLHPAQYRTRLCKDETGCARKVCFFAHKPEELRPVYASTGSAMPSPKSYSASGLDMTAMSPLALSSTSLPMPTVSTPPMSPLAAASSPKSGSMWQNKINLTPPSLQLPGSRLKAALSARDLEMEMELLGLESPARQQQQQQQQLIEEIARISSPSFRSKEFNRIVDLNPTNLDDLLASADPSVFSQLHGLSVQPSTPTQSGLQMRQNMNHLRASYPSNIPSSPVRKPSAFGFDSSAAVATAVMNSRSAAFAKRSQSFIDRGAATHHLGLSSASNSSCRVSSTLSDWSSPTGKLDWGVNGDKLNKLRKSTSFGFRNSGVTASPIAQPEFGAEPDVSWVHSLVKDVPSERSEIFGAEKQQYDLSKEMLPPWMEQLYIEQEQMVA 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00149 735 SUPERFAMILY Ankyrin repeat 10 213 IPR036770 -
Gma14g00149 735 Gene3D - 325 387 - -
Gma14g00149 735 PANTHER UNKEMPT FAMILY MEMBER 78 734 IPR045234 -
Gma14g00149 735 Gene3D - 58 216 IPR036770 -
Gma14g00149 735 ProSiteProfiles Zinc finger C3H1-type profile. 324 351 IPR000571 GO:0046872
Gma14g00149 735 ProSiteProfiles Ankyrin repeat region circular profile. 169 203 - -
Gma14g00149 735 SMART ANK_2a 169 201 IPR002110 GO:0005515
Gma14g00149 735 SMART ANK_2a 132 164 IPR002110 GO:0005515
Gma14g00149 735 ProSiteProfiles Ankyrin repeat profile. 169 204 IPR002110 GO:0005515
Gma14g00149 735 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29 78 734 - -
Gma14g00149 735 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 329 349 IPR000571 GO:0046872
Gma14g00149 735 Pfam Ankyrin repeats (3 copies) 132 200 IPR002110 GO:0005515
Gma14g00149 735 SMART c3hfinal6 324 350 IPR000571 GO:0046872
Gma14g00149 735 SMART c3hfinal6 359 382 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00149 Gma-Chr14 1198414 1207963 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00149 88 730 C2H2 Transcription Factor Family AT5G12850 39.859 6.72e-140 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gma14g00149 Ank_2 1.5e-06 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00149 - - gmx:100783376 1306.97