Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00130 ATGGCCAACAACGGTGTAAAGGAGCCCTTGCTGTGGGTATCACTTGATGCGACTCAAAAGACTAAACAGCAGCTAAACAAGAGAAGCCTCCTCCGTTTTAGAAGTGCTCCTCACGCAGAAATTGTTCCTACTGAGACAAATGGCAATGAATCAATTCCCCATAGTGCGTCCATATTTCAGAATTTACATCCAAGCTTTAAAAGAGTGGCTATCTACCTTGCAGTCTATTTAGGTGTTGGTGCTTTAATCTTCTACCTTGTCCGGAACCAGATTAAGGGGCAGAAAACAGATGGAATTCTTGATGCTTTGTACTTTACAATTGTGACAATGACAACTGTTGGATATGGAGACCTTGTGCCAAATAGCCACCTTACAAAACTACTTGCATGTGCTTTTGTTTTCTCTGGGATGGCATTGATTGGACTAATTGTAAGCAAAGCAGCAGACTACTTAGTTGAGAAACAGGAACTTTTGCTAGTTAAAGCCATGCGCATGCACCAAAAAGTTGGTTCAACTGAAATTTTAAGGGAGGTTCAGACCAATAAAACAAGATACAAATTATTTCTAGTCTTTTTCCTTCTTTTGATTCTCATCATCGCGGGGACAATTTTTTTGGTCACAGTTGAGAAATTGGATGTTATTGATGCATTCTACTGTGTTTGTTCTACAATTACAACCCTGGGTTATGGGGATCAAAGTTTCTCAACTCAAGCAGGAAGAATATTTGCTGTGTTTTGGATATTGACAGGTACTATTACTTTAGCTCAGCTTTTCCTCTACATTGCTGAGCTAAACACTGAAATCAGACAAAAGGAACTTGTCAAGTGGGTACTTACAAGGAAAGTGACCAATTCAGATTTGGAGGCTGCAGATCTTGATGTGGATGGGACTGTGAGGGCTGCGGAATTCgttatttataagctcaaagagatggggaagattagtcaagaagatatatcactTGTGATGCAGGAGTTTGAACAGCTTGATGTTGATGATTCTGGCACACTATCAACTTCTGATATAACTCTTGCTCAGTCATCTTAG 1047 0.383 MANNGVKEPLLWVSLDATQKTKQQLNKRSLLRFRSAPHAEIVPTETNGNESIPHSASIFQNLHPSFKRVAIYLAVYLGVGALIFYLVRNQIKGQKTDGILDALYFTIVTMTTVGYGDLVPNSHLTKLLACAFVFSGMALIGLIVSKAADYLVEKQELLLVKAMRMHQKVGSTEILREVQTNKTRYKLFLVFFLLLILIIAGTIFLVTVEKLDVIDAFYCVCSTITTLGYGDQSFSTQAGRIFAVFWILTGTITLAQLFLYIAELNTEIRQKELVKWVLTRKVTNSDLEAADLDVDGTVRAAEFVIYKLKEMGKISQEDISLVMQEFEQLDVDDSGTLSTSDITLAQSS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00130 348 Pfam Ion channel 72 152 IPR013099 -
Gma14g00130 348 Pfam Ion channel 193 264 IPR013099 -
Gma14g00130 348 SUPERFAMILY Voltage-gated potassium channels 68 167 - -
Gma14g00130 348 Gene3D - 166 278 - -
Gma14g00130 348 PANTHER TWO PORE POTASSIUM CHANNEL A 21 343 - -
Gma14g00130 348 ProSitePatterns EF-hand calcium-binding domain. 330 342 IPR018247 -
Gma14g00130 348 SUPERFAMILY Voltage-gated potassium channels 158 314 - -
Gma14g00130 348 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 21 343 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gma14g00130 348 Gene3D - 63 157 - -
Gma14g00130 348 PRINTS Two pore domain K+ channel signature 108 136 IPR003280 GO:0005267|GO:0016020|GO:0071805
Gma14g00130 348 PRINTS Two pore domain K+ channel signature 225 234 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00130 Gma-Chr14 1064461 1067482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00130 49 348 Ion Channels AT5G55630 65.894 6.02e-151 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00130 K05389 - gmx:100800137 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00130 14 1064461 1067482 Gma14g00130 14 1064461 1067482 ECH
Gma14g00130 14 1064461 1067482 Gma02g02805 02 53643325 53646406 GST