Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00102 ATGGCGGGAACCCTAAATCTCACGCCTCTCACCGGTGCCGGCAGGACTCTCCGGCCTCCGTTCAGGATCTCAATTCGGGCATTCACGGCGACGGCGATCGATTCCCGGCGAGCGGCGAGCCTCTATGAGGTGCTCCGGATCAAGCAGAACGCTTCGGCGGTGGAGATAAAGTCGGCATACCGGAACCTTGCGAAGGTGTATCACCCTGATTCGGCGCTCCGTCGGTCGGAATCGGACGAACGGGACTTCATCGAGATCCACGACGCTTACGAGACGCTGTCGGATCCGTCGGCGAGAGCACTGTATGATCTGTCGTTGATGGCGGCGCGCGATGATAATCGCTCGTTCTCGTCTTTGGTTGCTGCTCCGAATGGCTCTTCCGGATTCTACTATCAGACCCAATCAGCACCCGAATTTCCCGGATCCGAGATACCCAGAAGGAAAAGATTAAAACTTTGGTGTTTTCATCGATCTCTGGGGAAAGATGTGTTGTGGGGGGAGAATTTGCATGCTTTGCACGTGTCTGGTTCTGGTGGTGATCGCCATCGGGTTGGTATTCGGGTTCGGAGTGTTCAAGCATGGATTCCACAAGATCAAAGACACTGTTAG 609 0.5517 MAGTLNLTPLTGAGRTLRPPFRISIRAFTATAIDSRRAASLYEVLRIKQNASAVEIKSAYRNLAKVYHPDSALRRSESDERDFIEIHDAYETLSDPSARALYDLSLMAARDDNRSFSSLVAAPNGSSGFYYQTQSAPEFPGSEIPRRKRLKLWCFHRSLGKDVLWGENLHALHVSGSGGDRHRVGIRVRSVQAWIPQDQRHC 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00102 202 Pfam DnaJ domain 41 103 IPR001623 -
Gma14g00102 202 ProSiteProfiles dnaJ domain profile. 40 106 IPR001623 -
Gma14g00102 202 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 20 121 - -
Gma14g00102 202 CDD DnaJ 42 95 IPR001623 -
Gma14g00102 202 ProSitePatterns Nt-dnaJ domain signature. 83 102 IPR018253 -
Gma14g00102 202 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 20 121 - -
Gma14g00102 202 Gene3D DnaJ domain 29 124 IPR036869 -
Gma14g00102 202 PRINTS DnaJ domain signature 42 60 IPR001623 -
Gma14g00102 202 PRINTS DnaJ domain signature 60 75 IPR001623 -
Gma14g00102 202 PRINTS DnaJ domain signature 78 98 IPR001623 -
Gma14g00102 202 SUPERFAMILY Chaperone J-domain 40 117 IPR036869 -
Gma14g00102 202 SMART dnaj_3 39 98 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00102 Gma-Chr14 846092 848706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00102 42 103 C2H2 Transcription Factor Family AT1G74250 45.455 1.06e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00102 - - gmx:100786034 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00102 14 846092 848706 Gma14g00102 14 846092 848706 ECH
Gma18g00673 18 6844396 6845273 Gma14g00102 14 846092 848706 PCT
Gma08g03127 08 47980911 47981837 Gma14g00102 14 846092 848706 PCT
Gma14g00102 14 846092 848706 Gma18g00673 18 6844396 6845273 PCT
Gma14g00102 14 846092 848706 Gma08g03127 08 47980911 47981837 PCT