Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00098 ATGGCGCATAGGTTGCTCAGAGATCACGAAGCCGACGGTTGGGAACGCTCCGACTTCCCCATCATCTGCGAATCCTGCCTCGGCGACAGCCCCTATGTTCGAATGACAAGAGCTGAGTATGACAAGGAGTGCAAGATTTGTACACGGCCATTCACTGTTTTTAGATGGAGACCTGGTCGAGATGCAAGATATAAGAAAACTGAGATCTGTCAGACATGTAGTAAATTGAAAAATGTCTGTCAAGTGTGCCTTCTGGATCTTGAGTATGGACTACCAGTTCAAGTCCGGGACACAGCTCTCAATATTGATTCCCATGATGCCATTCCAAAAAGTGATGTTAATCGGGAGTATTTTGCTGAAGAGCACGACCGTAGGGCTAGAGCTGGTATAGATTATGAATCCTCTTATGGTAAAGTACGCCCAAATGATACTATCCTGAAGCTTCAAAGAACAACACCATACTACAAAAGAAACCGGGCACATATTTGCAGTTTCTACATTAGGGGTGAGTGTACCAGAGGAGCTGAGTGCCCTTATAGACATGAGATGCCAGAAACTGGGGAATTGTCTCAACAAAATATTAAAGATCGTTATTATGGGGTGAATGATCCAGTGGCCTTGAAGCTACTTGGCAAGGCAGGGGAGATGAACACTCTGGAGGCTCCTGAAGATGAGAGCATTAAAACTCTCTATGTTGGTGGACTTGATGCTAGGGTCACTGAGCAGGATTTGCGGGATCACTTCTATGCGCACGGAGAAATCGAATCCATCAAAATGGTTCTCCAACGGGCTTGTGCTTTTGTAACATATACAACCAGAGAAGGTGCAGAAAAGGCAGCTGAAGAACTCTCCAACAAACTGGTCATTAAGGGCCTAAGGCTAAAGCTGATGTGGGGCAGGCCTCAGACATCGAAACCTGAGTCAGATGGCTCTGATCAAGCAAGGCAGCAGGCTTCTGTGGCTCATAGTGGATTGTTGCCTCGGGCAGTGATATCACAGCAGCAGAACCAGGACCAAACACAAGGAATGGTTTACTATAACAATCCACCAGGACCACCACCTCTTCAGCAGGAAAGAAGCTACTACCCATCAATGGATCCTCAAAGAATGGGTGCTCTTGTTGCATCTCAAGATGGTCCTCCTGGTGGGCCTTCTGGGTCAGGGGAGAACAAGCCTAGTTCGGACAAGCAGCAAATGCAAAATTATACCCATCCAATGATGCCACCTCCACCTGGCCAATATCATCATCAGTATTATCCTCCATATGGTTATATGCCACCAGTTTCCCCTTATCAACAGTACGCATCTCCATACAATGCTGCAGTGGCTCCATCCCAGACACCAGCTGCAAATCATCCTTATCAGCATTCTATGCAGCCAGGGTCTGGACAGGCTGCACAT 1401 0.4704 MAHRLLRDHEADGWERSDFPIICESCLGDSPYVRMTRAEYDKECKICTRPFTVFRWRPGRDARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALNIDSHDAIPKSDVNREYFAEEHDRRARAGIDYESSYGKVRPNDTILKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYRHEMPETGELSQQNIKDRYYGVNDPVALKLLGKAGEMNTLEAPEDESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGRPQTSKPESDGSDQARQQASVAHSGLLPRAVISQQQNQDQTQGMVYYNNPPGPPPLQQERSYYPSMDPQRMGALVASQDGPPGGPSGSGENKPSSDKQQMQNYTHPMMPPPPGQYHHQYYPPYGYMPPVSPYQQYASPYNAAVAPSQTPAANHPYQHSMQPGSGQAAH 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00098 467 MobiDBLite consensus disorder prediction 299 321 - -
Gma14g00098 467 SUPERFAMILY CCCH zinc finger 159 182 IPR036855 GO:0046872
Gma14g00098 467 Pfam Torus domain 146 194 IPR032297 -
Gma14g00098 467 ProSiteProfiles Zinc finger C3H1-type profile. 157 184 IPR000571 GO:0046872
Gma14g00098 467 SMART rrm1_1 229 297 IPR000504 GO:0003723
Gma14g00098 467 MobiDBLite consensus disorder prediction 334 414 - -
Gma14g00098 467 Gene3D - 149 206 - -
Gma14g00098 467 PANTHER PRE-MRNA-SPLICING FACTOR RBM22 1 462 IPR039171 GO:0003723
Gma14g00098 467 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 230 288 IPR000504 GO:0003723
Gma14g00098 467 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 49-LIKE 1 462 - -
Gma14g00098 467 CDD RRM_RBM22 227 300 - -
Gma14g00098 467 SUPERFAMILY RNA-binding domain, RBD 222 310 IPR035979 GO:0003676
Gma14g00098 467 MobiDBLite consensus disorder prediction 387 403 - -
Gma14g00098 467 Gene3D - 212 310 IPR012677 -
Gma14g00098 467 MobiDBLite consensus disorder prediction 442 467 - -
Gma14g00098 467 MobiDBLite consensus disorder prediction 304 320 - -
Gma14g00098 467 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 228 301 IPR000504 GO:0003723
Gma14g00098 467 SMART c3hfinal6 157 183 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00098 Gma-Chr14 807174 810621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00098 215 368 Eukaryotic Initiation Factors Gene Family AT1G49760 30.061 2.40e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00098 K12872 - gmx:100810440 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00098 14 807174 810621 Gma02g02840 02 53876603 53879452 GST