Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00095 ATGCAATCCAAATCTGAAACTGCAAATCAACTGAGGTCTGATCCACGTTCCTTTGCACCTAACCAATCTTATTCTGAACCCTGGTGGCGAGGTATTCAGTGCAATCCTGTCCCCCAAGCAATGTCAGGAGTGAATATATCTAATTCATCTTCACTTGAACGCCCTAATGGTGATTCAGAATCCAGTGAAGAAGATGATGATGCCACTAAAGAACCACAACCCACTGCTCCTAATCAACCAGGAAATTATGGACAAGACCACCAAGCGTTGCAACATTCTTCATCATCTGCACCTTTGGTGCGTGATGATTGCCTTACACAGGCTCCACAACTGGAACTTGTTGGCCACTCAATTGGATACGCTCCTTTTATAGGAATGCCTCATGCCAGAATGGCTTTGCCCCTTGAGATGGCTCAAGAGCCTGTTTATGTGAATGCCAAACAATACCAAGGAATTCTGAGACGAAGACAGGCTCGTGCCAAAGCAGAGCTTGAAAAGAAATTAATAAAAGTCAGAAAGCCTTATCTTCATGAATCCCGGCATCAGCATGCTATAAGAAGAGCACGAGGTAATGGAGGGCGTTTTGCAAAGAAAACTGAAGTTGAGGCTTCAAACCACATGAATGAGGAAAAGGATATGGGTACTGGCCAAGTCCCATTGTCACGGTCAATTAGTTCATCTGGTTTTGGATCACTACCCTCTGATTCTGCCGAGACCTGGAATTCGCCTAGTGTGCAACAAGGTGCAAGAGGATCTCAAGTGCATGAGAGATTTGAAGAACGCAACTATGCAAATGTTTTGCAGTCATCATCTACTTCTTGTTTGCACTCGGGTGAAAGAGCGGAGGAAGGGGACTGTTCAGGTCAGCAACGGggaagcatctcgtcggagcacacctcacagaggcgtcttgcTATTCAGTAA 924 0.4297 MQSKSETANQLRSDPRSFAPNQSYSEPWWRGIQCNPVPQAMSGVNISNSSSLERPNGDSESSEEDDDATKEPQPTAPNQPGNYGQDHQALQHSSSSAPLVRDDCLTQAPQLELVGHSIGYAPFIGMPHARMALPLEMAQEPVYVNAKQYQGILRRRQARAKAELEKKLIKVRKPYLHESRHQHAIRRARGNGGRFAKKTEVEASNHMNEEKDMGTGQVPLSRSISSSGFGSLPSDSAETWNSPSVQQGARGSQVHERFEERNYANVLQSSSTSCLHSGERAEEGDCSGQQRGSISSEHTSQRRLAIQ 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00095 307 MobiDBLite consensus disorder prediction 38 56 - -
Gma14g00095 307 MobiDBLite consensus disorder prediction 1 97 - -
Gma14g00095 307 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9 37 298 - -
Gma14g00095 307 MobiDBLite consensus disorder prediction 263 277 - -
Gma14g00095 307 MobiDBLite consensus disorder prediction 218 251 - -
Gma14g00095 307 PRINTS CCAAT-binding transcription factor subunit B signature 141 163 IPR001289 GO:0003700|GO:0006355
Gma14g00095 307 PRINTS CCAAT-binding transcription factor subunit B signature 172 195 IPR001289 GO:0003700|GO:0006355
Gma14g00095 307 MobiDBLite consensus disorder prediction 288 307 - -
Gma14g00095 307 MobiDBLite consensus disorder prediction 204 307 - -
Gma14g00095 307 ProSitePatterns NF-YA/HAP2 subunit signature. 143 163 IPR018362 GO:0003677|GO:0016602
Gma14g00095 307 Gene3D - 138 200 - -
Gma14g00095 307 ProSiteProfiles NF-YA/HAP2 family profile. 138 198 IPR001289 GO:0003700|GO:0006355
Gma14g00095 307 SMART cbf3 137 198 IPR001289 GO:0003700|GO:0006355
Gma14g00095 307 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 140 195 IPR001289 GO:0003700|GO:0006355
Gma14g00095 307 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 37 298 IPR001289 GO:0003700|GO:0006355
Gma14g00095 307 MobiDBLite consensus disorder prediction 72 97 - -
Gma14g00095 307 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00095 Gma-Chr14 794578 796711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00095 56 307 CCAAT-HAP2 Transcription Factor Family AT3G20910 46.595 4.38e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Gma14g00095 CBFB_NFYA 5.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00095 K08064 - gmx:100815617 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00095 14 794578 796711 Gma02g02842 02 53888936 53892862 GST
Gma18g00658 18 6684646 6688182 Gma14g00095 14 794578 796711 PCT
Gma08g03116 08 47868013 47871555 Gma14g00095 14 794578 796711 PCT
Gma14g00095 14 794578 796711 Gma18g00658 18 6684646 6688182 PCT
Gma14g00095 14 794578 796711 Gma08g03116 08 47868013 47871555 PCT