Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00088 ATGTCTTCTACTTCTTCTTCGTCATCATCATCATCATCAACTTCTTCTTCAACCCCATATGACGCTGTTGCCCCTGATATCCCTGGCCCTAGTACGAGGAGAACCACCCGTAGTGGTCAATTTGAAGCTTCTTCCTCCTCCTCTCAGCGTCAACGTGCTATGAATGAGGTCTTGCCTGAGCCTTTTCTTGAAGCTTTGGCCACCCAACTTGCCCTTGATGCTGCCAACTACAATGGTCGTCTTTCTGCTGCTTCTGCCCTTGCCATTTTATTTCAGGTATGTTCCACGTGGCGAGAGGTGTCGCGGTCGGATCTGCTGTGGCAGCGGCTCACGAGACGCATATGGCGACGCACCTATCGACTGAGGGCCACGTGGCAGCTGGAGTACATGTATTGGCATCGGACGGCCAGGAACTTCTCGACAGGGAGACACAGGTTTTTCGACCCACCGGTGTTTGACCCTTCGGATCACCACCTCCTCCAGAACCTGCTCTGTCGCTGCCTCGCCCTCTCCGACACCCACCTGGCCTGCGGCTTCGTCGACGGCACCGTGCGCCTCTTCGACCTCGAAACCCGGGCCCACGTCACCACCTTCTTGTCCCTACACGGCCACCTCTTCGGGCCTTTCTCACGCTCAGTCTCGGGCATTGTTATCTTCAACTCTAACATTGCCTTCGCCAGGCTGGACGGGGATATCTACGTGGATAACGTGAACGGGCCCGGGCCTGGGCCCAGCCAAGCTCGCCGGGCCGTGGAGGGTGACGTTGTCAACAACGGGGTGCTGGTCGGGTTCGCTGGAACGGGCCGGTGGTGGGTGGGCCTGTTCGCGGGAATAGCGGGGCGGGCTTTTCAGATATGGGACGCGCGGAGCGAGGAGCGCGTGTTCGTTGGTGGTTCTTTGACGGATCCAGAAACGGTTATGGGGTGGCATATGCTGACGGAGTTAGTTGAAGCCGTGGGGCGCGTGCGGGTGACGGAGCGTGAGTATGTTGTGGCGTGCACGGGTTCGAGGTTGGTGTGTTTCAGTTTTCGGAACCCGGAGGTGTTGTTGCGTGACGTGGGGTCCACGACGGGGTTCGTGGTGAGTTCGCTGGACGCGAGTCAGGAGGCGTATGTGGTGGTTGAGAGGAACGGCGTGGGAACGGTTCGGCGAGTGAGCACGTTGGAGCGGTTGAGTCGGTTTCGGTTGAACCGGTTATTATGGGTTCAGGGTTTGTGGGCTTGCATGAACCTTGGCTACGCGTTAACCTATTCGCCTTCGCCTTCGCCTTCCTTGAGGGTTTGGGACATTGAGCAAGCCATAGGACGCTTGTGTGTCACACTTGGCCTCAGAGCTGGAGAGCTGAATAGCTTCGTGGCCAATGACAGACACGTCGCTATCTCTTCCAATGACAATAACATTAACTTATTGGATTTTGGTGTACAGGATCCTTAG 1434 0.5697 MSSTSSSSSSSSSTSSSTPYDAVAPDIPGPSTRRTTRSGQFEASSSSSQRQRAMNEVLPEPFLEALATQLALDAANYNGRLSAASALAILFQVCSTWREVSRSDLLWQRLTRRIWRRTYRLRATWQLEYMYWHRTARNFSTGRHRFFDPPVFDPSDHHLLQNLLCRCLALSDTHLACGFVDGTVRLFDLETRAHVTTFLSLHGHLFGPFSRSVSGIVIFNSNIAFARLDGDIYVDNVNGPGPGPSQARRAVEGDVVNNGVLVGFAGTGRWWVGLFAGIAGRAFQIWDARSEERVFVGGSLTDPETVMGWHMLTELVEAVGRVRVTEREYVVACTGSRLVCFSFRNPEVLLRDVGSTTGFVVSSLDASQEAYVVVERNGVGTVRRVSTLERLSRFRLNRLLWVQGLWACMNLGYALTYSPSPSPSLRVWDIEQAIGRLCVTLGLRAGELNSFVANDRHVAISSNDNNINLLDFGVQDP 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00088 477 MobiDBLite consensus disorder prediction 31 54 - -
Gma14g00088 477 PANTHER WD40 REPEAT PROTEIN 12, 37 8 475 - -
Gma14g00088 477 Gene3D - 150 473 IPR015943 GO:0005515
Gma14g00088 477 MobiDBLite consensus disorder prediction 1 21 - -
Gma14g00088 477 PANTHER TRANSCRIPTIONAL REGULATOR STERILE APETALA 8 475 - -
Gma14g00088 477 MobiDBLite consensus disorder prediction 1 54 - -
Gma14g00088 477 SUPERFAMILY WD40 repeat-like 164 469 IPR036322 GO:0005515
Gma14g00088 477 Gene3D - 44 140 - -
Gma14g00088 477 SUPERFAMILY F-box domain 80 134 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00088 Gma-Chr14 725690 730349 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Gma14g00088 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00088 - - gmx:100807240 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00088 14 725690 730349 Gma02g02850 02 53959496 53964051 GST