Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00079 ATGTCCCAAGCAACCTCGTCTTCAGCTGGTGGGGGTGATGGTGGTGCCAACATTGAACTTGGTGCAACCTTACTCCTCACCACCACCGGCAACAGCAAGTACACCAGAATATGGCGTAGAAGTTTGTACATAAGATTCCTCATCTCTGTCAAGAAGCCAACAACTTCCATCGACAACCATGAGTCGCCACCGTCACTACTTTCTTCAGTACCGTACACTTCATTGCCTCCTGCTAGAACCTCCTCTTCCGTTGCAATTGATATTAAAGAAGAAGAAACAGAAGAGCACATTAGGAGAGATATTGCTCGAATTGTAAAGGAGAAGGACTTGAGATCTCTCGGTCTGCTTGGTGGCGTTGACTCTGTTTCCGCTGTCCTATGTCGTCAACATCAACACTCAAAGGGCAACACCACTATACCATTACCAGTTCTTGGAACAAACTTGTCCAAGTTTTTATTCAACAGCTGCAAGGTCTACCGTTGCACAATTCTGGTGATGTTAATCTCCGCTGGGTTGTCATTCGCCATAGGATTCAAGCAGGAGGGACCTAAACATGGTTGGCATGATGGTGTTGCTATAGTTTTTGCTGTTTTACTACTGGTTGCAGTAACTTCAGTAGCAAACTTTCGGCGTGAGAGGAAAATGTTGAAATTGGCAAAGACAAAGGTCGAGTTGCAATTCAGGGTTAAGAGAGGTGAAGAGACCCTAATGGTTCCCAGATCTAATATTGTGGTTGGTGACAGAGTATGCCTGTGGCCAGGTGATGAGATTCCAGCAGACGGTTTGCTTGTAAGTGATGGCATCCTTTTGCTGGCTGAGCCTGAGGCAACAAAAAGCAAACATGATCCTAAGGGGAACCCGTTTCTTATATCTGGTTCAAAGGTGATTGGGGGCCAGGGAAGGATGGTGGTAACATCAGTTGGAACCAACACCAATTTGGCTGAAAGGAGGGGCTTGTTGGAGCGACTAATCGAGAGGCCAATTTCTTACATTGACATAGCTGCTCTTTTTATCTCACTACTGGTTTTACTTGTGATCTTCATTCGCCTAATTTCTGAAAAAGATGGGAACAATAGTGGGCTGCCTGAAATGAAGGGGAAGGTCTCAATTGGCTTGTTGATGAAGGCACTTCAGAGAGCTTTCTTGAAACCACAAGGAACGGTTTCCACTTTAACACGTCTTGTCACTGTTGCAATACTATGCGTGCAGCATGGAATGCCACTTGTGGTCACAATTTCTCTCAAGTACCAGATGGATAAGATAGTTCCAAAGGAAGATGCTGTTCTTAATGATTTATCAGCTAGTACGACAATGGGGTTGGTAACTGTCATCTGCATTGATGTATCAGGTGAGCTCATATCTAAACCAATGGAGGTTAGCAAAGTATTGATCGGGCAGAAAGATGTCAGCATGGTTGAGGGATCAGAAATAGATACAACTGCGCTTGACATGCTTAAACAAGGAGTTGGTTTATCAATCCTTGCACCAGAGATTTCTCTTTCCTCTTTGTCTAATTCACTTGTTTCTTGGGCAGAAAAAACATTGGAAGTGAACTTGAGATCTTTCACAGAAGAGAAATTTGACATTCTTAAGCACAGCAATCTGAATTCTGGCAAAGAAGGCAGCGGAGTTTTGGTAAGAAAAATTGGGGACAATGAACAAGTTCTGTACATGCACTGGAGTGGAGCTGCATCCACAATATTGGATATGTGTTCACAGTACTATGATAGTACAGGGGAATTCCATGCAATCAAAAACCAGAAGATCAAATTTGGGCAGGTGATTGAAGAGATGAAGGATGGTGGCCTTGAGCCAATTGCTTTTGCTTATAGAGAAACAGATGGAAAAGAACTTGAGAAAGGACTGATCTTGTTAGGACTGATAGGTCTCAAATGCACTACTAGTCTAGAATCCATAAAATCAGGTTTGGAAAATCTGAAAAAAAATGATGCAAATATACAGATCAAACTGGTCTCGGAGGATGGCATCATGGAAGTGAAAGGCATAGCTTGTGGACTAGGACTAGAATATGATAATGTGCTTGAAGGAAAAGAGCTTCGGGATTTGAATGGGGAAGCTAGATTAGACAAAGTGGATCAAGCCCATGTAATGGGAAGCTTCCATCCTAAAGACAAACTTCTCATGATACAGTGCTTGCAAGAGAAAGGTAAGGTGGTTGCATTCATTGGAACAAGGTTGATGACTAATCATTCTTCAGTTCTGAAGGTAGCTGATGTGGGGATAGTTTTTGATCCTCTGAGAACAATAGTGGATATAGATAGTTGTGACATAACAATCAAATTTTTCAGTGTATTGGAACCAATTGTGATGGCTGGCAGAAGTCAATACCGCAATATTCAGAAGTTCATTCAACTTCAGCTGACATGCACCATATCAGGGTTAGTCATAACCTTGATTACAACATGTACTGGAGATTCCCCCCTTGCAGCATCCCAGTTAATTTGGGTGAATGTCTTGATGTGCATTCTGGGTGGCCTAATGATGGTATTGAAGCTAACCGGCGAGGAGGAACAGATTGCTAAACAACCATCTGATCATAGGAACCAACATATTGTAACCAAAGAAATCTGGAAAAACGTTGTTATTCAGGTTTTATATCAGACTTCTGTGTCAATGATACTTGAGTTCGGTGGAGATGTTACTGACAAGGAAAAAAAGGTTAGGGAAACCATGATCTTCAACACATTCCTATTTTGCCAACTCTGCAATTTTCTCAACTACCAGGTTTTGAAGATGGTTGTTCAGAGCTTCTATTTCTTGGTGGCCTTAGGTGGTTGTTTTCTTATGCAAGTGCTGGTGATTGAGTATGCTAAAGGCCTAGCAGATTGCATGCGGCTGAATGCTGCGAGATGGGGTATCTGTGTCTTGATTGGTGCTCTTGCATGCGTATTTGAATGGACGTTGAAGAATATTCTTCCAGTTATTCTCAATCCTAGCACCAACATTGCTTCAGAATCAATTACTTCACCTTCGTTCTATCTTTCTCCAGTATTTCCAATTCTGATGTTCGTTCTGTTCCCTGTAGGACTAATTTTTAGTCAAATAGGCATGAACATGACAATTCGTTAG 3090 0.422 MSQATSSSAGGGDGGANIELGATLLLTTTGNSKYTRIWRRSLYIRFLISVKKPTTSIDNHESPPSLLSSVPYTSLPPARTSSSVAIDIKEEETEEHIRRDIARIVKEKDLRSLGLLGGVDSVSAVLCRQHQHSKGNTTIPLPVLGTNLSKFLFNSCKVYRCTILVMLISAGLSFAIGFKQEGPKHGWHDGVAIVFAVLLLVAVTSVANFRRERKMLKLAKTKVELQFRVKRGEETLMVPRSNIVVGDRVCLWPGDEIPADGLLVSDGILLLAEPEATKSKHDPKGNPFLISGSKVIGGQGRMVVTSVGTNTNLAERRGLLERLIERPISYIDIAALFISLLVLLVIFIRLISEKDGNNSGLPEMKGKVSIGLLMKALQRAFLKPQGTVSTLTRLVTVAILCVQHGMPLVVTISLKYQMDKIVPKEDAVLNDLSASTTMGLVTVICIDVSGELISKPMEVSKVLIGQKDVSMVEGSEIDTTALDMLKQGVGLSILAPEISLSSLSNSLVSWAEKTLEVNLRSFTEEKFDILKHSNLNSGKEGSGVLVRKIGDNEQVLYMHWSGAASTILDMCSQYYDSTGEFHAIKNQKIKFGQVIEEMKDGGLEPIAFAYRETDGKELEKGLILLGLIGLKCTTSLESIKSGLENLKKNDANIQIKLVSEDGIMEVKGIACGLGLEYDNVLEGKELRDLNGEARLDKVDQAHVMGSFHPKDKLLMIQCLQEKGKVVAFIGTRLMTNHSSVLKVADVGIVFDPLRTIVDIDSCDITIKFFSVLEPIVMAGRSQYRNIQKFIQLQLTCTISGLVITLITTCTGDSPLAASQLIWVNVLMCILGGLMMVLKLTGEEEQIAKQPSDHRNQHIVTKEIWKNVVIQVLYQTSVSMILEFGGDVTDKEKKVRETMIFNTFLFCQLCNFLNYQVLKMVVQSFYFLVALGGCFLMQVLVIEYAKGLADCMRLNAARWGICVLIGALACVFEWTLKNILPVILNPSTNIASESITSPSFYLSPVFPILMFVLFPVGLIFSQIGMNMTIR 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00079 1029 Gene3D - 442 454 IPR023214 -
Gma14g00079 1029 PANTHER CATION TRANSPORTING ATPASE 74 996 - -
Gma14g00079 1029 SUPERFAMILY Calcium ATPase, transmembrane domain M 160 980 IPR023298 -
Gma14g00079 1029 SUPERFAMILY HAD-like 445 831 IPR036412 -
Gma14g00079 1029 Gene3D - 162 441 - -
Gma14g00079 1029 PANTHER CATION-TRANSPORTING ATPASE PLANT 74 996 - -
Gma14g00079 1029 Gene3D - 212 321 - -
Gma14g00079 1029 Pfam Cation transporting ATPase, C-terminus 813 976 IPR006068 -
Gma14g00079 1029 Gene3D - 455 480 IPR023299 GO:0000166
Gma14g00079 1029 Gene3D - 493 631 IPR023299 GO:0000166
Gma14g00079 1029 Gene3D - 633 768 IPR023214 -
Gma14g00079 1029 Pfam E1-E2 ATPase 227 414 - -
Gma14g00079 1029 Gene3D - 769 986 - -
Gma14g00079 1029 SUPERFAMILY Calcium ATPase, transduction domain A 226 316 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00079 Gma-Chr14 636454 640336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00079 33 985 Primary Pumps ATPases AT3G63380 33.171 2.08e-129 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00079 K01537 - gmx:102661547 1916.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00079 14 636454 640336 Gma02g02856 02 54010901 54013054 GST