Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00068 ATGGTGTCAGTTTCCGGTGAACCGATGCAAAGATTGGGAGCATACATGTTGGAAGCACTTGTTGCACGATTGGCTAGCACAGGGACTACAATCTACAAAGCTTTGAAGTACTACGAAGCAGCAAATGAAGAGGACCTCTCCTACATGCACATGCTTCATCAAATTAGTCTCAGCTTCAAATTTGGATACATGTGTGCAAACAGAGCCATTGCACAAGCTATGAGAGACGAAGACATAATTCATATAATTGACTTCCATATTGATGAAGGAAGCCAGTGGCTCACTTAG 288 0.4271 MVSVSGEPMQRLGAYMLEALVARLASTGTTIYKALKYYEAANEEDLSYMHMLHQISLSFKFGYMCANRAIAQAMRDEDIIHIIDFHIDEGSQWLT 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00068 95 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 1 95 - -
Gma14g00068 95 Pfam GRAS domain family 2 95 IPR005202 -
Gma14g00068 95 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 95 IPR005202 -
Gma14g00068 95 ProSiteProfiles GRAS family profile. 1 95 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00068 Gma-Chr14 571976 572263 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00068 1 94 GRAS Transcription Factor Family AT2G04890 63.830 2.95e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma14g00068 GRAS 1.2e-25 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00068 - - ccaj:109814368 142.895