Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma14g00029 ATGGAAAATAGAGGTGAGAGTGCCGATGCTGAGCTTCAACTTGACGCTGATTTTGTGCCGGTTCCTGCCCAGACATGTACTGGAAATGAAAAGAGTAACAAGGCCTCCCGGATTCCTCAGTCTAGACGACCTAATTTATCCTCACTGCAAATACCAGCATGGTCACTAGATATTGCATTATCTACTTTTGCAAAGACTGATGGTCCTTCGGTTTCACGATCAAGTCCTGGTTCCACAAGAGGACTTCCCCCAAGGCCAAATTCAGCCAAAGTCAGGTCTTCAATGAGAGGTTTACTTCCTCAGAGGAGCTTCAAGATAAATGCCTGTTCCCAGGATATTGAAAGGACAGGTCTCATAGTTCCCAACACTCCCCCATCAGATGCTCCTTTGGACAAACCTTCCACTTCAACTTCTCTGTCTCTTAATAATAGGGTTATCTCCCCATCAACAAAAGTTTCACATTCATTACCAGTTACTCCATTTGCAACTTCAAGTGCAGAGAATGAACATGGAAGACATCTAGGGCGTGATTCTGATTTAAGTACAATGGAAGTTCATCAGCATATGACACGATCATTTTCAGTCCCAGTTGATGGCAAAGCCACTAATTTAAGGGTTACAGATTCTAGGGGCTTGATTCGTGTAATTTCAGCAAAACGACATCTTGAAACTGTTGGTGGAAAGTCAACTGATGGTGCTTTCGTTCCAGAGATTGCCATTGAAGATGCTACTGAGGATATTCCAGAGGAACAAGCAGTTTGCAGGATTTGTTTGGTGGAGCTTGGGGAAGGAGGGAATACACTTAAGATGGAATGCAGTTGTAAAGGTGATCTTGCACTTGCTCACCAAGAATGTGCAGTAAAGTGGTTTAGTATTAAGGGAAACAGGACCTGTGATGTCTGCAAGCTGGATGTCCAGAACCTCCCAGTAACACTGTTGAAAATTTATAATCCTCTAACTCCTGCTAGGCAGGCATCAAATGTGCCACAACAGTCAGAAATAGTTTATTACAGGATCTGGCAGGATGTACCAGTACTTATCTTGGTCAGCATGCTTGCGTACTTTTGTTTTCTAGAGCAACTACTGGTTTCAGATTTGGGACCTCGTGCTCTTGCCATTTCATTACCATTCTCCTGTGTTTTAGGTCTCCTTTCATCTATGATTGCATCAACCATGGTGAGCAGGAGTTTCGTATGGGCTTATGCTTGCTTCCAGTTTGCAACTCTTATCCTGTTAGCTCATGTATTTTATACTATTCTCAATTTTAATGCAATTCTCTCCATTCTCCTTTCCACGTTCACTGGATTTGGGATTGCCATCAGTATGAATTCTCTCGTTATGGAATTCATCGGATGGAGAACTAGCAGGCAGGTTCAATCCTCCTTTGTAAATGTTAACTGGACAGAGCAGCAGCATCGTGAGCATGTACAAGAACAGGGACAGGAAGATGGAGGACAACATCAGCGACAAAGACAACAAGAGCATCATCTGCCGCAGCATGGCAACAGTTGA 1512 0.4339 MENRGESADAELQLDADFVPVPAQTCTGNEKSNKASRIPQSRRPNLSSLQIPAWSLDIALSTFAKTDGPSVSRSSPGSTRGLPPRPNSAKVRSSMRGLLPQRSFKINACSQDIERTGLIVPNTPPSDAPLDKPSTSTSLSLNNRVISPSTKVSHSLPVTPFATSSAENEHGRHLGRDSDLSTMEVHQHMTRSFSVPVDGKATNLRVTDSRGLIRVISAKRHLETVGGKSTDGAFVPEIAIEDATEDIPEEQAVCRICLVELGEGGNTLKMECSCKGDLALAHQECAVKWFSIKGNRTCDVCKLDVQNLPVTLLKIYNPLTPARQASNVPQQSEIVYYRIWQDVPVLILVSMLAYFCFLEQLLVSDLGPRALAISLPFSCVLGLLSSMIASTMVSRSFVWAYACFQFATLILLAHVFYTILNFNAILSILLSTFTGFGIAISMNSLVMEFIGWRTSRQVQSSFVNVNWTEQQHREHVQEQGQEDGGQHQRQRQQEHHLPQHGNS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma14g00029 503 ProSiteProfiles Zinc finger RING-CH-type profile. 246 308 IPR011016 GO:0008270
Gma14g00029 503 MobiDBLite consensus disorder prediction 473 503 - -
Gma14g00029 503 CDD RING_CH-C4HC3_MARCH 254 302 - -
Gma14g00029 503 PANTHER OS02G0165000 PROTEIN 24 480 - -
Gma14g00029 503 MobiDBLite consensus disorder prediction 473 496 - -
Gma14g00029 503 SUPERFAMILY RING/U-box 250 305 - -
Gma14g00029 503 Pfam RING-variant domain 254 301 IPR011016 GO:0008270
Gma14g00029 503 MobiDBLite consensus disorder prediction 65 82 - -
Gma14g00029 503 MobiDBLite consensus disorder prediction 65 92 - -
Gma14g00029 503 MobiDBLite consensus disorder prediction 1 45 - -
Gma14g00029 503 SMART ringv_2 253 302 IPR011016 GO:0008270
Gma14g00029 503 MobiDBLite consensus disorder prediction 121 141 - -
Gma14g00029 503 MobiDBLite consensus disorder prediction 25 45 - -
Gma14g00029 503 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 239 309 IPR013083 -
Gma14g00029 503 PANTHER OS02G0165000 PROTEIN 24 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma14g00029 Gma-Chr14 294508 301199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma14g00029 237 308 C3H Transcription Factor Family AT2G37950 45.205 4.74e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma14g00029 - - gmx:100798208 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma14g00029 14 294508 301199 Gma02g02897 02 54310778 54317937 GST
Gma20g00638 20 24083710 24096565 Gma14g00029 14 294508 301199 PCT
Gma14g00029 14 294508 301199 Gma20g00638 20 24083710 24096565 PCT