Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03342 ATGTGGCTTCCAAGTCCTAAAGCATCAGGGATTAGAAAGGGAGGAGGAGTAAATGGACTAGTGGCAGTGGCTATAGACAAGGATAAAGGAAGCCAATACGCTCTGAAATGGGCTGTTGATTGTCTTCTTACCAGAGGCCAGACTCTTATTCTAATCCACGTTTTGCACGGGACATCCTCACCTGTGTCTAGGGGTAACGAGGCCATTATATGTAACATTAACAGTTCATCTGCATCATCGCAGAGTTATCAACTTGATAACAATATCAAGGATCTATTTCTCACTTTCCATTGCTATTGTAGACGCAAAGAGatacaatgccttgatgtcctacttgaagacactgatgttgTGAAAGCAATAACAGAGTATGTCTCTTATGCAGCTATTGAGAACTTGGTGGTTGGTGCAACATCGAGGCATGGGTTTATTCGATTTAAGTCAAGTGCATCAAGTAGCATATCAAAGGGGGCACCGGACTTTTGTAACGTGTCTGTCATTTCAAAGGGCAAAGTCTCTTCAGTTCGGAAGGCTACTCGCCCAACCTCACATACATCACCACTTCTGAGCCATATACATGATCTAAATAACCGGGGCAAAAATCAACATGAGATATCCTCCAGACCTATGAATTTGGGAGACAGGACATCAATCAAACCTCACGGCTGGCTGGATGAATCTATTAAGTCTCCATTTGTAAGAGGAAGAGGCATGGATGGAATGTCATGCATGGACTTCCCAGAATCAGATACAGACATATCATTTGTAAGCTCCGAGAGGCCAAGCAGTGGACGTTCATCCTCCGTTTATGACTACATTGACGTAGGCCGAACTTCTCGAGTTTCTACCAATTCAGATCGTAGCTTCGGATCAACCCGATTGGGGGCTCTCAAGTTCAACAACCCCAATTCACCAGATACGTCATTCTCACATGAAAGCAGTGCAACATCATTTTCATATTCATTACAGAGCGAGGATGAAGCAGCAGAAGCTGATATGAGGAGGCTGAAGCTCCAGTTAAAGCAAACGATCAAAATGTACAGTACAGCATGCAGACAAGCACTTGCATCACAACAGAAGTTAATGGAGTTGACCCACTTGAGACTTGAGGAAGAAAAAAAAATACAAGAGGCACGATTGGCTCAGGAAGCTGCAATGGCAATTGCAGAGAAAGAGAAAGCAAGATGTAGAGTAGCCATGGAAACTGCTGAAGCATCTAAGAAAATTGCAGAGGTGGAAACACATAGAAGAGCGGGTGTTGAAGTTAAAGCTCTTAAAGAAGTAGAAGAAAAGAGGAAGCTATTGGACAATCTAGCCCTAACTGATGTAAGATATAGGAGATATTGTGTAGAGGAGATTGAAGCAGCCACAAACTACTTTTCTGAGCTCCAGAGAATTGGGGAAGGAGGTTATGGCCCTGTTTATAAATGTTATCTTGATCACACTCCAGTTGCTGTCAAGGTTCTACGTCCAGATGCTGCTCAAGGGAAGTCACAGTTTCAGCAAGAGATTGACATACTAAGCTGCATGAGACACCCAAACATGGTGCTTCTTCTAGGAGCATGTCCGGAGTATGGCATATTGATTTATGAATATATGGCTAATGGAAGCTTAGAAGATTGTCTGTTTAAAAAAAAGAACAAGCGTGTTCTGTCTTGGCAGTTGAGGTTCCGAATTGCTGCAGAGATAGGGACGGGCTTACTATTCCTGCATCAGGCCAAGCCTGAACCTTTAGTGCACCGTGATCTGAAACCAGGGAACATTTTGCTAGACCAGAATTATGTGAGTAAGATAAGTGATGTTGGATTGGCAAGGCTTGTCCCGGCTGTAGCTGAAAATGTAACACAATGCTGCATGACATCAGCAGCTGGAACATTTTGTTATATTGATCCCGAGTATCAGCAAACAGGAATGCTTGGTGTGAAGTCGGATGTTTATTCTTTGGGGATCATATTTCTACAATTATTGACAGGAAGGGCTCCAATTGGATTGGCTCACCATGCTGAAGAGTCTATAGAGAAGGATACCTTCGTGGAAATGCTGGACCCATCTGTTACTGACTGGCCTCTTGAACAAGCCTTGTGCCTTGCAAAAATAGCAGTCAAGTGTGCGGAACTCAGGCGAAAAGATAGGCCAGACCTTGCCAAACTAGTATTGCCAGAGCTAGATAAATTGAGAGACTTTGCTGAACAAAACATGACCATGACCATGCCCATCATTTTAGGATGCACTGCGCCTTCACCCAGCCACAGTGAAGCTTCCATGCAACAGGATGTGATCAGTGACCTGCAGCTTGCACATTCCGAAAGCTCATCAGCTCCATCAACGCCCACAGAAGGAAAACCTTAA 2349 0.4317 MWLPSPKASGIRKGGGVNGLVAVAIDKDKGSQYALKWAVDCLLTRGQTLILIHVLHGTSSPVSRGNEAIICNINSSSASSQSYQLDNNIKDLFLTFHCYCRRKEIQCLDVLLEDTDVVKAITEYVSYAAIENLVVGATSRHGFIRFKSSASSSISKGAPDFCNVSVISKGKVSSVRKATRPTSHTSPLLSHIHDLNNRGKNQHEISSRPMNLGDRTSIKPHGWLDESIKSPFVRGRGMDGMSCMDFPESDTDISFVSSERPSSGRSSSVYDYIDVGRTSRVSTNSDRSFGSTRLGALKFNNPNSPDTSFSHESSATSFSYSLQSEDEAAEADMRRLKLQLKQTIKMYSTACRQALASQQKLMELTHLRLEEEKKIQEARLAQEAAMAIAEKEKARCRVAMETAEASKKIAEVETHRRAGVEVKALKEVEEKRKLLDNLALTDVRYRRYCVEEIEAATNYFSELQRIGEGGYGPVYKCYLDHTPVAVKVLRPDAAQGKSQFQQEIDILSCMRHPNMVLLLGACPEYGILIYEYMANGSLEDCLFKKKNKRVLSWQLRFRIAAEIGTGLLFLHQAKPEPLVHRDLKPGNILLDQNYVSKISDVGLARLVPAVAENVTQCCMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQLLTGRAPIGLAHHAEESIEKDTFVEMLDPSVTDWPLEQALCLAKIAVKCAELRRKDRPDLAKLVLPELDKLRDFAEQNMTMTMPIILGCTAPSPSHSEASMQQDVISDLQLAHSESSSAPSTPTEGKP 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03342 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 578 590 IPR008271 GO:0004672|GO:0006468
Gma13g03342 782 Gene3D HUPs 20 167 IPR014729 -
Gma13g03342 782 MobiDBLite consensus disorder prediction 763 782 - -
Gma13g03342 782 SMART serkin_6 460 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g03342 782 SUPERFAMILY Protein kinase-like (PK-like) 444 718 IPR011009 -
Gma13g03342 782 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 166 - -
Gma13g03342 782 CDD STK_N 20 170 - -
Gma13g03342 782 Pfam Protein kinase domain 461 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g03342 782 Gene3D Phosphorylase Kinase; domain 1 440 532 - -
Gma13g03342 782 PANTHER OS02G0152300 PROTEIN 18 766 - -
Gma13g03342 782 MobiDBLite consensus disorder prediction 175 194 - -
Gma13g03342 782 PANTHER BNAA05G18880D PROTEIN 18 766 - -
Gma13g03342 782 ProSiteProfiles Protein kinase domain profile. 460 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g03342 782 MobiDBLite consensus disorder prediction 175 192 - -
Gma13g03342 782 Pfam Universal stress protein family 21 154 IPR006016 -
Gma13g03342 782 Gene3D Transferase(Phosphotransferase) domain 1 533 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03342 Gma-Chr13 47387314 47393574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03342 1 764 Receptor kinase-like Gene Family AT1G78940 55.796 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gma13g03342 Pkinase 7.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03342 - - gmx:100818435 1441.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03342 13 47387314 47393574 Gma15g00008 15 68864 73028 GST
Gma13g03342 13 47387314 47393574 Gma07g00012 07 143143 146101 PCT
Gma07g00012 07 143143 146101 Gma13g03342 13 47387314 47393574 PCT