Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03337 ATGAGTAGCAACGTTAACATGGCCTCCACCTCGCGTGGTTCCACCTCCTCCTCCAATGGCCTTCTCACCGTCACCATTGCCGGCAGCAGCAGCAGCCACTCTGACGACCCCACCACCAACGACAGCGACAACGATGAAGACGAATTGCTCGTTGATCCTAACGATCCTTTCGATATTACGCATACCAAAAATGCACCGCCCGAGTCCCTCAAGCGTTGGCGACAAGCAGCTTTCGTCCTCAATGCGTCCAGGCGTTTTAGATACACTCTTGACTTGAAAAAGGAAGAGGAGAAAGAGCAAAAGAAAAGCATGATTAGATCCCACGCACAAGTCATCAGAGCAGCTTTGCTTTTCAGATTGGCTGGTGAACGGGAACTAGTGACAAGTTCAGCAGCAGTGGCATCCCCATCTCCAGTTGGTGAGTATGCAGTTGGGCTCGAACAACTTGTTTCAATGACTAAGAATCAGAATATTTCTGCTTTACAACAATATGGAGGGGCAAGTCTACTTCAACACATTTTTGTTAAAGGCTTATCAAATTTACTAAAATCAATTCCGGATAAGGGGATTAATGGAGATGATGCTGATCTATCAAAGAGGAAAAATGCATTTGGAACTAATACATATCCTCGGAAAAAGGGGAGAAGTTTCTGGAGGTTTCTATGGGAATCTTGGCAAGATCTGACTCTTATAATATTGATTATAGCAGCTGTGGTGTCATTAGTACTTGGAATAAAAACAGAGGGCTTGGAAGAAGGGTGGTACGACGGGGGAAGCATTGCTTTCGCTGTTTTTCTTGTCATTATAGTTACAGCTGTCAGTGATTATCGGCAATCTTTGCAGTTTCAGAACTTAAATGCTGAGAAACAAAATATAAAATTGGAGGTCATTAGAGGTGGCAGAACAATACAAATATCGATATTTGATATTGTTGTTGGTGATTTAGTGCCCCTTAAAATAGGAGATCAGGTTCCTGCCGATGGAGTTGTAATCACTGGTCACTCTCTTGCCATTGATGAATCGAGTATGACTGGTGAAAGCAAGATTATTCACAAGGACCAAAAAACACCTTTTTTGATGTCCGGTTGCAAAGTAGCAGATGGAATTGGTGCTATGCTGGTAACTGGTGTTGGTATAAATACTGAGTGGGGACTGCTGATGGCAAGTATCTCAGAGGATACTGGAGAAGAGACTCCATTACAGGTTCGTTTGAATGGAGTAGCAACTTTTATTGGCATAGTTGGGCTTACTGTAGCTGTTTGTGTCCTTGCAGTCCTGTTGGGAAGATACTTCTCTGGCCATTCGAAAGATTTAGATGGAAAAGTACAATTTGTTGCTGGAGAGACTAGTATTAGCAAAGCAGTAGATGGGGTCATCAAAATTTTTACCATTGCAGTAACAATTGTGGTGGTTGCAGTGCCCGAAGGTCTACCTTTAGCAGTTACCTTAACTTTGGCATACTCAATGCGGAAAATGATGGCAGACAAAGCCTTGGCAAGTATCTTTTTAAGGCTGTCCGCATGCGAAACTATGGGATCTGCTACAACAATTTGCAGTGATAAGACAGGAACTTTGACCTTAAATCAGATGACGGTAGTTGAGGCATTTGTTGGAAGGAAGAAACTAAATCCACCAGATGACTTGACAAAATTGCATCCCGAAGTTTCATCTCTGATAAATGAGGGCATTGCGCAAAATACAACTGGCAATATTTTTGTGCCTAAGGATGGTGGAGAGGCGGAGGTTTCAGGGTCTCCTACAGAGAAGGCAATTCTTTCTTGGGCAGTGAAGTTGGGGATGAATTTTGATCTTATTAGATCAAATTCAACAATTCTCCACGTCTTCCCCTTCAATTCTGAGAAAAAGCGAGGTGGTCTTGCTCTGAAACTGCCGGACTCTGCAGTACATATACATTGGAAAGGAGCTGCAGAGATAGTTCTAGGAAAATGTACTCAATATCTTGATTCAGATGGTCACTTGAAATCTATTGAAGAAGAGAAGGTattcttcaagaacgctatcgaagacatggctgctcagagcttgcgttgtgttgccattgcatacagatcgtatgatttagacaaaattccatctaatgaggaggaattagaccagtggtgcttacctgaacacgagcttgtcttgcttgctattgttggaataaaggatccttgtcgccctggagtcaaggatgctgtgaaagtatgcactgaagctggtgttaagGTACGGATGGTTACGGGTGACAATCTTCAAACAGCAAAAGCAATAGCTTTAGAGTGTGGAATACTGATGTCAACTGAAGATGCTGTTGAGCCAAATATAATTGAAGGAAAGACATTTCGTGAACTATCTGAAAAAGAAAGGGAACAAGTTGCGAAAAAGATAACAGTTATGGGGAGGTCTTCTCCTACTGACAAGCTGTTGATCGTGCAAGCACTACGTACAGGTGGTGAAGTTGTTGCCGTCACAGGAGATGGCACCAATGATGCTCCTGCACTTCATGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACAGAAGTTGCAAAAGAAAGTTCAGATATTATAATCTTGGATGATAACTTTGCATCAGTAGTAAAGGTTGTTCGCTGGGGCCGTTCTGTATATGCAAATATTCAGAAATTTATTCAGTTCCAACTCACTGTTAATGTTGCTGCTCTTGTAATAAATGTAGTGGCAGCAATATCTTCTGGTGATGTTCCTTTAAATGCTGTACAGCTTTTGTGGGTCAACCTTATCATGGACACACTTGGGGCTCTTGCACTGGCTACGGAACCGCCAACAGACAACCTTATGCACAGATCACCAGTTGGCCGAAGGGAACCCCTTATAACAAATGTCATGTGGAGGAACTTGATCGTACAGGCTCTCTATCAAGTCATCGTCCTTCTCGTTCTTAACTTCGGCGGTGAAAGTATTCTACGTAATAATCAGGATTCTATAGCCCATACCATACAAGTGAAGAATACTTTAATTTTCAATGCATTCGTCTTTTGTCAAATATTCAACGAGTTCAATGCTCGAAAACCAGAAGAGATGAATGTCTTCCGGGGAGTGACTAAGAACCGTCTCTTCATGGGAATTGTTGGAATGACCTTCGTGCTTCAGATAATCATCATCGAGTTCCTTGGAAAATTCACAACGACGGTGAAGCTTGATTGGAAGCTGTGGCTTGCTTCTCTTTGTATTGGGCTTGTCAGCTGGCCTCTTGCGATAGTTGGAAAATTAATTCCAGTTCCCAAAACACCTCTGTCCCGATATTTCAGGAGATTGAGGAAGTCCAAGTCCCGTGCACCACCACCGTGCAATTCATAG 3345 0.3982 MSSNVNMASTSRGSTSSSNGLLTVTIAGSSSSHSDDPTTNDSDNDEDELLVDPNDPFDITHTKNAPPESLKRWRQAAFVLNASRRFRYTLDLKKEEEKEQKKSMIRSHAQVIRAALLFRLAGERELVTSSAAVASPSPVGEYAVGLEQLVSMTKNQNISALQQYGGASLLQHIFVKGLSNLLKSIPDKGINGDDADLSKRKNAFGTNTYPRKKGRSFWRFLWESWQDLTLIILIIAAVVSLVLGIKTEGLEEGWYDGGSIAFAVFLVIIVTAVSDYRQSLQFQNLNAEKQNIKLEVIRGGRTIQISIFDIVVGDLVPLKIGDQVPADGVVITGHSLAIDESSMTGESKIIHKDQKTPFLMSGCKVADGIGAMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAVCVLAVLLGRYFSGHSKDLDGKVQFVAGETSISKAVDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALASIFLRLSACETMGSATTICSDKTGTLTLNQMTVVEAFVGRKKLNPPDDLTKLHPEVSSLINEGIAQNTTGNIFVPKDGGEAEVSGSPTEKAILSWAVKLGMNFDLIRSNSTILHVFPFNSEKKRGGLALKLPDSAVHIHWKGAAEIVLGKCTQYLDSDGHLKSIEEEKVFFKNAIEDMAAQSLRCVAIAYRSYDLDKIPSNEEELDQWCLPEHELVLLAIVGIKDPCRPGVKDAVKVCTEAGVKVRMVTGDNLQTAKAIALECGILMSTEDAVEPNIIEGKTFRELSEKEREQVAKKITVMGRSSPTDKLLIVQALRTGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDNLMHRSPVGRREPLITNVMWRNLIVQALYQVIVLLVLNFGGESILRNNQDSIAHTIQVKNTLIFNAFVFCQIFNEFNARKPEEMNVFRGVTKNRLFMGIVGMTFVLQIIIIEFLGKFTTTVKLDWKLWLASLCIGLVSWPLAIVGKLIPVPKTPLSRYFRRLRKSKSRAPPPCNS 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03337 1114 Pfam Cation transporting ATPase, C-terminus 910 1087 IPR006068 -
Gma13g03337 1114 SFLD p-type atpase 504 877 IPR044492 -
Gma13g03337 1114 SMART Cation_ATPase_N_a_2 169 245 IPR004014 -
Gma13g03337 1114 PRINTS Sodium/potassium-transporting ATPase signature 511 532 - -
Gma13g03337 1114 PRINTS Sodium/potassium-transporting ATPase signature 258 278 - -
Gma13g03337 1114 PRINTS Sodium/potassium-transporting ATPase signature 637 655 - -
Gma13g03337 1114 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 174 1089 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Gma13g03337 1114 MobiDBLite consensus disorder prediction 1 37 - -
Gma13g03337 1114 CDD P-type_ATPase_Ca_PMCA-like 197 958 - -
Gma13g03337 1114 Pfam Cation transporter/ATPase, N-terminus 176 240 IPR004014 -
Gma13g03337 1114 Gene3D - 67 119 - -
Gma13g03337 1114 Coils Coil 660 680 - -
Gma13g03337 1114 SFLD C1.7: P-type atpase like 504 877 - -
Gma13g03337 1114 SUPERFAMILY Calcium ATPase, transmembrane domain M 177 1089 IPR023298 -
Gma13g03337 1114 Gene3D - 195 391 - -
Gma13g03337 1114 Gene3D - 528 725 IPR023299 GO:0000166
Gma13g03337 1114 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 451 543 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma13g03337 1114 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 791 905 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma13g03337 1114 MobiDBLite consensus disorder prediction 1 66 - -
Gma13g03337 1114 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 525 722 IPR023299 GO:0000166
Gma13g03337 1114 Pfam E1-E2 ATPase 291 493 - -
Gma13g03337 1114 Gene3D - 223 1078 - -
Gma13g03337 1114 Gene3D - 515 870 IPR023214 -
Gma13g03337 1114 SUPERFAMILY Calcium ATPase, transduction domain A 292 388 IPR008250 -
Gma13g03337 1114 PANTHER CATION TRANSPORTING ATPASE 54 1104 - -
Gma13g03337 1114 ProSitePatterns E1-E2 ATPases phosphorylation site. 520 526 IPR018303 -
Gma13g03337 1114 SUPERFAMILY HAD-like 516 930 IPR036412 -
Gma13g03337 1114 Pfam haloacid dehalogenase-like hydrolase 515 839 - -
Gma13g03337 1114 PANTHER CALCIUM-TRANSPORTING ATPASE 54 1104 - -
Gma13g03337 1114 Pfam Ca2+-ATPase N terminal autoinhibitory domain 54 97 IPR024750 GO:0005516
Gma13g03337 1114 PRINTS P-type cation-transporting ATPase superfamily signature 740 750 - -
Gma13g03337 1114 PRINTS P-type cation-transporting ATPase superfamily signature 718 729 - -
Gma13g03337 1114 PRINTS P-type cation-transporting ATPase superfamily signature 825 844 - -
Gma13g03337 1114 PRINTS P-type cation-transporting ATPase superfamily signature 849 861 - -
Gma13g03337 1114 PRINTS P-type cation-transporting ATPase superfamily signature 339 353 - -
Gma13g03337 1114 PRINTS P-type cation-transporting ATPase superfamily signature 518 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03337 Gma-Chr13 47312092 47329299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03337 14 1106 Primary Pumps ATPases AT3G21180 74.771 0.0 1645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03337 K01537 - gmx:100817367 2051.94