Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03333 ATGGCTGATGATGGAAGCAGGAGGGAATTGATATTCAGGTCGAAGCTTCCGGATATCTACATCCCCAAACATATGCCCCTCCACTCTTACTGCTTCGAGAATTTGAGAGAGTGTGGTTCACGCCCCTGCCTGATCAATGCCCCCACGGGAGACGTCTACAGCTACCACGAGGTGGACAGCACCGCCAGAAAGGTGGCGAGGGGGCTGAAGAAAGAGGGCGTGGAACAGGGCCAGGTCATCATGATCCTCCTCCCCAATTGCCCCGAATTCGTCTTCTCGTTTCTTGGCGCATCCCACCGCGGTGCCATGGCCACTGCCGCCAACCCTTTCTTCACCCCCGCCGAGATTGCAAAGCAAGCCCATGCCTCCAATGCCAAGCTCCTCATCACCCAGGCCTCTTACTACGACAAAGTCAAGGACCTCCGCGACATCAAGCTCGTATTCGTCGACTCTTGTCCCCCCCATACAGAGGAGAAGCAGCATCTCCATTTCTCACATCTGTGTGAGGATAACGGTGACGCTGATGTTGATGTTGATGTTGATATCAAGCCCGATGACGTGGTTGCATTGCCTTATTCTTCGGGAACAACTGGTCTTCCCAAGGGAGTGATGCTGAGCCACAAGGGGCTGGTGACCAGCATTGCTCAGCAGGTTGACGGTGATAATCCCAACCTCTATTACCACTGCCACGACACCATCCTCTGCGTGCTTCCCCTCTTTCACATTTACTCTCTCAACTCCGTTCTTCTCTGTGGCTTGCGTGCCAAGGCTACCATTCTCCTCATGCCCAAGTTCGATATTAACTCCTTGCTTGCTCTCATTCACAAGCACAAAGTCACTATTGCCCCTGTCGTCCCTCCCATTGTTCTCGCCATTTCCAAATCACCCGATCTCCACAAGTACGACCTGTCTTCCATCAGAGTCTTGAAGTCCGGGGGAGCCCCTCTGGGTAAGGAACTCGAAGACACTCTCAGAGCTAAATTCCCCAACGCCAAACTTGGCCAGGGATACGGAATGACTGAGGCAGGGCCTGTGCTAACAATGTCTTTAGCTTTTGCTAAAGAACCGATAGACGTGAAACCAGGTGCATGTGGAACCGTTGTAAGAAATGCAGAGATGAAGATTGTCGATCCTGAAACCGGTCATTCTTTACCCAGAAACCAATCCGGTGAAATTTGCATAAGAGGCGACCAGATTATGAAAGGTTATCTAAATGATGGAGAGGCTACAGAGAGAACCATAGACAAAGATGGTTGGTTGCACACAGGTGACATCGGTTACATCGACGATGACGATGAGTTATTCATCGTTGACAGGCTCAAGGAATTGATCAAATACAAAGGATTTCAAGTGGCTCCAGCTGAACTTGAAGCCCTTCTTCTCACTCATCCTAAGATCTCTGATGCTGCTGTTGTTCCAATGAAGGATGAAGCCGCGGGAGAGGTACCTGTTGCATTTGTGGTCATATCAAATGGTTATACCGACACAACCGAGGATGAAATTAAGCAGTTTATCTCCAAACAGGTGGTGTTTTACAAAAGAATAAACCGAGTATTCTTCATTGATGCAATTCCCAAGTCACCGTCAGGCAAAATCTTGCGCAAGGATCTAAGAGCAAAGATAGCGGCAAGTGTTCCAAAATGA 1644 0.4964 MADDGSRRELIFRSKLPDIYIPKHMPLHSYCFENLRECGSRPCLINAPTGDVYSYHEVDSTARKVARGLKKEGVEQGQVIMILLPNCPEFVFSFLGASHRGAMATAANPFFTPAEIAKQAHASNAKLLITQASYYDKVKDLRDIKLVFVDSCPPHTEEKQHLHFSHLCEDNGDADVDVDVDIKPDDVVALPYSSGTTGLPKGVMLSHKGLVTSIAQQVDGDNPNLYYHCHDTILCVLPLFHIYSLNSVLLCGLRAKATILLMPKFDINSLLALIHKHKVTIAPVVPPIVLAISKSPDLHKYDLSSIRVLKSGGAPLGKELEDTLRAKFPNAKLGQGYGMTEAGPVLTMSLAFAKEPIDVKPGACGTVVRNAEMKIVDPETGHSLPRNQSGEICIRGDQIMKGYLNDGEATERTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPKISDAAVVPMKDEAAGEVPVAFVVISNGYTDTTEDEIKQFISKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKIAASVPK 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03333 547 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Gma13g03333 547 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 543 - -
Gma13g03333 547 Gene3D - 441 544 IPR045851 -
Gma13g03333 547 Gene3D - 5 440 IPR042099 -
Gma13g03333 547 SUPERFAMILY Acetyl-CoA synthetase-like 12 543 - -
Gma13g03333 547 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 6 543 - -
Gma13g03333 547 Pfam AMP-binding enzyme C-terminal domain 455 531 IPR025110 -
Gma13g03333 547 CDD 4CL 21 537 - -
Gma13g03333 547 Pfam AMP-binding enzyme 38 446 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03333 Gma-Chr13 47271345 47274307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03333 4 509 Monolignol Biosynthesis Gene Families AT1G51680 69.412 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03333 K01904 - gmx:547944 1080.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g03333 13 47271345 47274307 Gma15g00019 15 192597 195585 GST