Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g03319 ATGGACGAATTCCTCGCTCTAATTTGCCCTAATTCTCCATTCGTACGCATCTCTTCCTCTTTCCAAAGTTGTTTATTTTTTGCGGTCAACATAGTGACTGTTGTTATGATTGTTGTGCTTGGATTTAATCAGAAGATTGGTCGTGGATTTCGGCTATCAGATTCCCAGATGACCCTTCCAGAAAAATTTGTCCTGAACCTTATACCAGCTGTTGGAGCTTGTCTTTCAATCGTAGACTTAATTTTTCTGTGGAAGAAAGACCACAATAGTCACTTTGTTGGATATCATAAATGGTTCAATAGCTGTTCTGAGTTGATTTTGTGGATAAATATCATTCTATTCACAAAGTGTGCCAGCAGCCATTACATTGTCTTCAACCGTGGGTTATGTTTCTGGTGGATTCTGAAAGCAATATTGGCAGTTTTCTATTTGATGACAAAGTTTTCATCACTGAAGGTTTCAGTCTGCATCATGGAAAGCTTAGTTGTTCTCTTGAATATCTCATTTAGCATAGCTATCAATGTGATCCGGATAAAGATACCATCTTTCAAAAGCAGTTTATTGGAAGATCCACTTCTTTCGAATGGAGTAGACCTTGAGGAAGGTGGCTATAATGACCTTGGAAATAATGGAAACTTTTGGGATTTGATGACTTTCAAATTCATAACTCCAGTAATGAATCATGGTGTGATAAAGCAATTAGACCCTGAAGATCTGTTGCCGCTACCTACTGACATTGGTCCTTCTTCTTGTCATGATGTGATTTTATCCTGCTGGCAAGCTCAACTGAGTAACAATGATTCGAACCCATCCTTGTTTAGAGCACTCTGTAGTGCGTATGGATGGCCATATCTCTGCCTGGGTTTATTGAAGGTGATTAATGATTGTATTGGTTTTGCGGGACCATTGCTTCTCAATAAGCTGATCCAGTTTCTTCAGCAAGGTTCAGTGAATTTGGACGGGTATTTACTTGCATTATCCTTGGGTCTCACCTCTATAATTAAATCCTTTTTAGATACACAATATACTTTTCATCTTTCCAAACTGAAGCTGAAGCTGCGATCTAGTATCATGACTCTAATCTATGAGAAGTGCCTACGTGTGAACTTAGCAGAGCGTTCAAAATTCACAAATGGCGAAATTCAGACATTTATGTCAGTGGATGCTGACCGTACTGTCAACTTGTGTAATAGTTTCCATGATATGTGGAGCCTGCCTTTACAAATTGGAGTGGCGCTCTATCTTTTGTATACTCAAGTCAAATTTGCATTTGTATCTGGATTAGCGATAACCATTTTATTGATACCAGTGAATAAATGGATATCACAATTGATTGCAAGGGCTACTGAGCAAATGATGAAGGAAAAGGATGAAAGGATTCGTAGGACAGGAGAACTTTTGACTTATATTCGCACTTTAAAGATGTATGGATGGGAACTTCTTTTTTCTAGTTGGTTGATGGATACAAGATCTTTGGAAGTCAAACACTTAGCTACTCGGAAGTACTTGGATGCATGGTGTGTTTTCTTTTGGGCTACAACGCCAACACTCTTTTCTCTTTTCACATTTGGACTCTTTGCACTGATGGGACATGAACTTGATGCTGCAATGGTTTTCACTTGTCTTGCTTTGTTTAACACGCTGATTTCACCACTAAATTCATTCCCCTGGGTAATTAATGGATTGATTGATGCCATCATATCCTCCAGACGATTGAGTAGGTTTCTCTCTTGTCCTGAACGTAAATTTAAAGTGGGAGACACAAATTCGAGTCCATCATCATTCCTAAGTAAACAGCCTGATTCTGTACAAGGTTTGGGTGTCTTTATACAAGATGCATGTTGTACTTGGTCAAGCAGTGAGGAACAAGCATTAAATTTGGTGTTGAATCATGTGACTCTAAGTGTGTCCCAGGGTTCCTTTGTTGCAGTTATTGGAGAGGTTGGTTCAGGTAAATCATCCCTGTTATATTCAATTCTTGGAGAAATGCAGCTTGCTCGTGGCTCTGTTTATTCCAATGAATCCATTGCTTATGTACCACAGGTCCCTTGGATTTTATCTGGAACAGTGCGTGACAACATATTGTTCGGGAAAAGCTATGATCCTGAAAGGTATACTGATACACTGCAGGCATGTGCATTAGATGTTGATGTCTCAATGATGGTTCGAGGTGACATGGCTTATATTGGAGAGAAAGGAGTCAACTTATCAGGTGGACAGAGAGCTCGACTTGCTTTGGCAAGGGCCATGTATCATGACTCAGATGTTGTTATGCTTGATGATGTCCTGAGTGCAGTTGATGTACAAGTTGCTCAACGTATCTTACACAATGCCATTTTAGGTCCTCTTATGCAGAGAAAAACCCGATTGCTCTGTACTCATAACATCCAGGCAATATCTTCTGCTGATATGATTGTTGTAATGGACAAGGGACGCATAAAGTGGATGGGAAATTCAGCTGACTTTCCAATTTCTTCTTATACAGAATTCTCTCCATTGAACGAAATTGATTCAGCTTTACATAATCATAGACAATCTTGCAGCACAAATCTTTCATCCAAATCCAAGGAGCAGTCTCTTCCTAATTCAGATATTGTGCATGTTCTGGAGGGAGCAGAGGAGATAGTTGAAGTTGAGTTGAGGAAAGAGGGGAAAGTTGAACTTGGAGTGTATAAGAGTTATGCTGTCTTCACTGGTTGGTTTATGACAGTCATTATATGCCTATCAGCCATTCTGATGCAAGCTTCTCGTAATGGGAATGATTTATGGCTGTCATTTTGGGTTGATACAACAACAGAAAGCAGTCAAACAAGATATTCTGTGTCTTTCTATCTGGCTATACTATGTCTCTTTTGTATTATGAATTCCCTTTTCACATTGGTGAGGGCATTCTCTTTTGCATTTGGTGGATTGCAAGCAGCAACTAAGGTACACAATAAATTGCTCAACAAGCTTGTCAATGCACCTGTGCAATTCTTTGATCAGACCCCGGGGGGAAGAATACTGAATAGGTTATCTTCAGATCTTTATACAATTGATGATTCTCTTCCGTTCATTATGAACATTCTCCTAGCTAATTTTGTAGGCTTGTTGGGTATTACAATAATTTTGTGTTATGTACAGGTCTTCTTCTTACTCTTGCTATTGCCATTTTGGTATATCTACAGTAGACTACAGTTCTTCTACAGGTCAACATCAAGAGAGTTACGAAGACTGGACAGTGTTTCTCGTTCTCCAATATATACATCTTTCACTGAAACACTTGATGGATCATCAACTATTAGGGCATTTAAGGCTGAGGACTTTTTCTTTGCCAAATTCATTGAACATATAACCTTGTATCAGAAGACTTCCTACACAGAGATAGTGGCAAGTTTGTGGCTTTCCTTGCGTCTTCAGTTATTAGGTGCATTTATCGTCTCATTCATAGCTGTGATGGCTGTTGTTGGATCTCATGGCAGTCTGCCTATCAACTTTGGTACCCCAGGACTGGTAGGATTGGCCCTCTCATATGCAGCTCCAATTGTGTCCCTGTTGGGGAGTTTTTTATCAAGCTTCACCGAAACAGAAAAGGAAATGGTTTCAGTTGAAAGAGCCCTTCAATACATGGACATTCCTCAAGAAGAACAAACTGGATGCCTATACTTGAGTCCAGATTGGCCAAATCAAGGAGTTATCGAATTCCAGTCTGTTACTTTGAAATATATGCCTTCTTTGCCAGCTGCACTCTGCAATCTTAGTTTTAGAATTGTAGGAGGGACACAAGTTGGAATAATTGGAAGAACAGGAGCTGGAAAGTCTAGTGTGTTAAATGCCCTTTTCCGCCTTACACCCATATGTACAGGCTCTATCACAATTGATGGCGTGGATATTAAAAATATTCCTGTCAGAGAACTACGTACACATTTGGCCATTGTTCCTCAGAGTCCATTTCTGTTCGAAGGATCATTAAGGGATAACCTAGATCCATTGAAAATGAATGATGACTTGAAAATATGGAATGTATTGGAGAAGTGTCATGTGAAAGAGGAAGTAGAAGCAGCTGGAGGGCTGGATGTTCTTGTAAAGGAAGCGGGGATGTCATTTTCAGTTGGCCAGAGGCAGCTTCTTTGCCTTGCACGTGCACTTCTGAAATCTTCAAAGGTTCTCTGTTTGGATGAATGCACGGCCAATGTAGACATTCAAACTGCTTCACTGCTGCAAAATACCATTTCCAGTGAATGCAAAGGAATGACAGTGATCACAATAGCTCATCGGATTTCAACTGTTATAAATATGGACAGCATTCTGATTCTTGACCATGGGAAGCTGGCTGAACAGGGAAATCCGCAGATTCTTCTGAAAGATGGCACCTCTATATTTTCTAGTTTTGTGAGAGCTTCAGCTATGTAA 4392 0.3985 MDEFLALICPNSPFVRISSSFQSCLFFAVNIVTVVMIVVLGFNQKIGRGFRLSDSQMTLPEKFVLNLIPAVGACLSIVDLIFLWKKDHNSHFVGYHKWFNSCSELILWINIILFTKCASSHYIVFNRGLCFWWILKAILAVFYLMTKFSSLKVSVCIMESLVVLLNISFSIAINVIRIKIPSFKSSLLEDPLLSNGVDLEEGGYNDLGNNGNFWDLMTFKFITPVMNHGVIKQLDPEDLLPLPTDIGPSSCHDVILSCWQAQLSNNDSNPSLFRALCSAYGWPYLCLGLLKVINDCIGFAGPLLLNKLIQFLQQGSVNLDGYLLALSLGLTSIIKSFLDTQYTFHLSKLKLKLRSSIMTLIYEKCLRVNLAERSKFTNGEIQTFMSVDADRTVNLCNSFHDMWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWISQLIARATEQMMKEKDERIRRTGELLTYIRTLKMYGWELLFSSWLMDTRSLEVKHLATRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHELDAAMVFTCLALFNTLISPLNSFPWVINGLIDAIISSRRLSRFLSCPERKFKVGDTNSSPSSFLSKQPDSVQGLGVFIQDACCTWSSSEEQALNLVLNHVTLSVSQGSFVAVIGEVGSGKSSLLYSILGEMQLARGSVYSNESIAYVPQVPWILSGTVRDNILFGKSYDPERYTDTLQACALDVDVSMMVRGDMAYIGEKGVNLSGGQRARLALARAMYHDSDVVMLDDVLSAVDVQVAQRILHNAILGPLMQRKTRLLCTHNIQAISSADMIVVMDKGRIKWMGNSADFPISSYTEFSPLNEIDSALHNHRQSCSTNLSSKSKEQSLPNSDIVHVLEGAEEIVEVELRKEGKVELGVYKSYAVFTGWFMTVIICLSAILMQASRNGNDLWLSFWVDTTTESSQTRYSVSFYLAILCLFCIMNSLFTLVRAFSFAFGGLQAATKVHNKLLNKLVNAPVQFFDQTPGGRILNRLSSDLYTIDDSLPFIMNILLANFVGLLGITIILCYVQVFFLLLLLPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFTETLDGSSTIRAFKAEDFFFAKFIEHITLYQKTSYTEIVASLWLSLRLQLLGAFIVSFIAVMAVVGSHGSLPINFGTPGLVGLALSYAAPIVSLLGSFLSSFTETEKEMVSVERALQYMDIPQEEQTGCLYLSPDWPNQGVIEFQSVTLKYMPSLPAALCNLSFRIVGGTQVGIIGRTGAGKSSVLNALFRLTPICTGSITIDGVDIKNIPVRELRTHLAIVPQSPFLFEGSLRDNLDPLKMNDDLKIWNVLEKCHVKEEVEAAGGLDVLVKEAGMSFSVGQRQLLCLARALLKSSKVLCLDECTANVDIQTASLLQNTISSECKGMTVITIAHRISTVINMDSILILDHGKLAEQGNPQILLKDGTSIFSSFVRASAM 1463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g03319 1463 Pfam ABC transporter 1244 1390 IPR003439 GO:0005524
Gma13g03319 1463 ProSitePatterns ABC transporters family signature. 736 750 IPR017871 GO:0005524
Gma13g03319 1463 Pfam ABC transporter transmembrane region 286 552 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma13g03319 1463 Pfam ABC transporter transmembrane region 904 1153 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma13g03319 1463 Gene3D ABC transporter type 1, transmembrane domain 273 580 IPR036640 GO:0005524|GO:0016021
Gma13g03319 1463 SUPERFAMILY ABC transporter transmembrane region 275 580 IPR036640 GO:0005524|GO:0016021
Gma13g03319 1463 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 289 564 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma13g03319 1463 SUPERFAMILY ABC transporter transmembrane region 900 1208 IPR036640 GO:0005524|GO:0016021
Gma13g03319 1463 Pfam ABC transporter 629 761 IPR003439 GO:0005524
Gma13g03319 1463 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 904 1191 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma13g03319 1463 CDD ABC_6TM_MRP7_D1_like 287 572 - -
Gma13g03319 1463 CDD ABCC_MRP_domain2 1224 1443 - -
Gma13g03319 1463 CDD ABC_6TM_MRP7_D2_like 903 1203 - -
Gma13g03319 1463 CDD ABCC_MRP_domain1 610 812 - -
Gma13g03319 1463 PANTHER MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 7 241 1443 - -
Gma13g03319 1463 Gene3D - 1213 1460 IPR027417 -
Gma13g03319 1463 Gene3D - 603 849 IPR027417 -
Gma13g03319 1463 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1226 1459 IPR003439 GO:0005524
Gma13g03319 1463 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 608 835 IPR003439 GO:0005524
Gma13g03319 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 624 821 IPR027417 -
Gma13g03319 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1220 1450 IPR027417 -
Gma13g03319 1463 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 241 1443 - -
Gma13g03319 1463 Gene3D ABC transporter type 1, transmembrane domain 871 1210 IPR036640 GO:0005524|GO:0016021
Gma13g03319 1463 ProSitePatterns ABC transporters family signature. 1362 1376 IPR017871 GO:0005524
Gma13g03319 1463 SMART AAA_5 1252 1442 IPR003593 -
Gma13g03319 1463 SMART AAA_5 638 812 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g03319 Gma-Chr13 47143013 47159897 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g03319 601 863 Calmodulin-binding Proteins AT2G36910 26.259 2.06e-18 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g03319 K05674 - gmx:100814181 2769.57